Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.21□□□□□ -1.9
RPA3P35244 AC012498.1-201ENST00000424037 437 ntBASIC3.21□□□□□ -1.9
RPA3P35244 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.21□□□□□ -1.9
RPA3P35244 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.21□□□□□ -1.9
RPA3P35244 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 AC092185.1-201ENST00000491371 97 ntBASIC3.21□□□□□ -1.9
RPA3P35244 WBP1LP4-201ENST00000505043 344 ntBASIC3.21□□□□□ -1.9
RPA3P35244 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.21□□□□□ -1.9
RPA3P35244 NDUFB4P9-201ENST00000511646 388 ntBASIC3.21□□□□□ -1.9
RPA3P35244 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.21□□□□□ -1.9
RPA3P35244 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.21□□□□□ -1.9
RPA3P35244 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.21□□□□□ -1.9
RPA3P35244 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.21□□□□□ -1.9
RPA3P35244 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.21□□□□□ -1.9
RPA3P35244 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
RPA3P35244 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
RPA3P35244 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 AC066616.2-201ENST00000559334 1481 ntBASIC3.21□□□□□ -1.9
RPA3P35244 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.2□□□□□ -1.9
RPA3P35244 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 AL049737.1-201ENST00000413920 1403 ntBASIC3.2□□□□□ -1.9
RPA3P35244 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.2□□□□□ -1.9
RPA3P35244 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RPA3P35244 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
RPA3P35244 TAF9BP1-201ENST00000396646 746 ntBASIC3.2□□□□□ -1.9
RPA3P35244 MTATP6P31-201ENST00000406985 692 ntBASIC3.2□□□□□ -1.9
RPA3P35244 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
RPA3P35244 RPS3AP25-201ENST00000411660 793 ntBASIC3.2□□□□□ -1.9
RPA3P35244 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.2□□□□□ -1.9
RPA3P35244 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 AC008155.2-201ENST00000464337 397 ntBASIC3.2□□□□□ -1.9
RPA3P35244 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 AC025459.1-201ENST00000504072 156 ntBASIC3.2□□□□□ -1.9
RPA3P35244 RNU4-60P-201ENST00000517239 135 ntBASIC3.2□□□□□ -1.9
RPA3P35244 IGKV2-23-201ENST00000518729 323 ntBASIC3.2□□□□□ -1.9
RPA3P35244 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.2□□□□□ -1.9
RPA3P35244 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
RPA3P35244 AC053481.3-201ENST00000577881 843 ntBASIC3.2□□□□□ -1.9
RPA3P35244 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.2□□□□□ -1.9
RPA3P35244 AC112503.1-201ENST00000608436 391 ntBASIC3.2□□□□□ -1.9
RPA3P35244 AC084036.1-201ENST00000609190 508 ntBASIC3.2□□□□□ -1.9
RPA3P35244 AC110792.4-201ENST00000609843 298 ntBASIC3.2□□□□□ -1.9
RPA3P35244 AL354976.1-201ENST00000613843 387 ntBASIC3.2□□□□□ -1.9
RPA3P35244 AL392048.1-201ENST00000613946 534 ntBASIC3.2□□□□□ -1.9
RPA3P35244 AL157817.1-201ENST00000614264 790 ntBASIC3.2□□□□□ -1.9
RPA3P35244 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.2□□□□□ -1.9
RPA3P35244 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPA3P35244 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPA3P35244 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.19□□□□□ -1.9
RPA3P35244 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPA3P35244 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPA3P35244 RNU2-21P-201ENST00000410368 188 ntBASIC3.19□□□□□ -1.9
RPA3P35244 RNU2-6P-201ENST00000411404 190 ntBASIC3.19□□□□□ -1.9
RPA3P35244 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.19□□□□□ -1.9
RPA3P35244 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
RPA3P35244 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.19□□□□□ -1.9
RPA3P35244 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
RPA3P35244 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.19□□□□□ -1.9
RPA3P35244 CEACAMP4-201ENST00000457676 421 ntBASIC3.19□□□□□ -1.9
RPA3P35244 RPL7P49-201ENST00000471402 708 ntBASIC3.19□□□□□ -1.9
RPA3P35244 RPL32P34-201ENST00000486380 400 ntBASIC3.19□□□□□ -1.9
RPA3P35244 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.19□□□□□ -1.9
RPA3P35244 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 RN7SKP277-201ENST00000516895 283 ntBASIC3.19□□□□□ -1.9
RPA3P35244 UBE2NP1-201ENST00000545592 458 ntBASIC3.19□□□□□ -1.9
RPA3P35244 HIGD1AP1-201ENST00000550979 275 ntBASIC3.19□□□□□ -1.9
RPA3P35244 POLR2KP1-201ENST00000553226 168 ntBASIC3.19□□□□□ -1.9
RPA3P35244 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.19□□□□□ -1.9
RPA3P35244 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.19□□□□□ -1.9
RPA3P35244 MTCO3P22-201ENST00000603219 784 ntBASIC3.19□□□□□ -1.9
RPA3P35244 AC022387.2-201ENST00000604050 448 ntBASIC3.19□□□□□ -1.9
RPA3P35244 MIR6864-201ENST00000617935 70 ntBASIC3.19□□□□□ -1.9
RPA3P35244 LINC00216-201ENST00000623548 1126 ntBASIC3.19□□□□□ -1.9
RPA3P35244 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 MIR4278-201ENST00000636094 69 ntBASIC3.19□□□□□ -1.9
RPA3P35244 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
RPA3P35244 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPA3P35244 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms