Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RANP9-201ENST00000519957 271 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC068587.5-201ENST00000528506 175 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC109635.4-202ENST00000531666 412 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.89□□□□□ -1.47
NFKB1P19838 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC010653.1-201ENST00000571108 881 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC073539.2-201ENST00000597113 165 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.89□□□□□ -1.47
NFKB1P19838 RPL23AP92-201ENST00000603609 255 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AL670379.11-201ENST00000604059 253 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AL670379.10-201ENST00000604330 253 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AL670379.12-201ENST00000605291 253 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AL670379.9-201ENST00000605428 253 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC113194.1-201ENST00000606037 500 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC103710.2-201ENST00000609912 942 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC243654.2-201ENST00000612843 443 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 uc_338.34-201ENST00000617467 174 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.89□□□□□ -1.47
NFKB1P19838 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NFKB1P19838 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NFKB1P19838 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC138907.8-201ENST00000623981 2256 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 AL442128.2-201ENST00000620246 1824 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 CDC27P2-201ENST00000425026 1922 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.88□□□□□ -1.47
NFKB1P19838 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 RNU1-150P-201ENST00000362491 162 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 RNU5A-8P-201ENST00000364102 114 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 RNA5SP433-201ENST00000364491 114 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 RN7SKP186-201ENST00000365371 303 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 SNORA63.7-201ENST00000365579 123 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 RNU6-1029P-201ENST00000384109 107 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 Y_RNA.482-201ENST00000384377 111 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NFKB1P19838 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 VDAC1P9-201ENST00000412766 841 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 SKA2P1-201ENST00000425592 390 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 FABP7P2-201ENST00000429946 379 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AC079807.1-201ENST00000429993 481 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AL590233.1-201ENST00000430017 456 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.88□□□□□ -1.47
NFKB1P19838 REG1CP-206ENST00000447469 496 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.88□□□□□ -1.47
NFKB1P19838 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 RNA5SP503-201ENST00000517047 117 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.88□□□□□ -1.47
NFKB1P19838 MTND4P7-201ENST00000523876 130 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.88□□□□□ -1.47
NFKB1P19838 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.88□□□□□ -1.47
NFKB1P19838 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.88□□□□□ -1.47
NFKB1P19838 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 MYL12BP1-201ENST00000569826 507 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.88□□□□□ -1.47
NFKB1P19838 AC011477.5-201ENST00000586571 259 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.88□□□□□ -1.47
NFKB1P19838 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.88□□□□□ -1.47
NFKB1P19838 AC010424.2-201ENST00000607594 443 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.88□□□□□ -1.47
NFKB1P19838 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AC098657.3-201ENST00000620434 263 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.88□□□□□ -1.47
NFKB1P19838 AC000095.2-202ENST00000637415 154 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 AC009902.3-201ENST00000606235 2172 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.88□□□□□ -1.47
NFKB1P19838 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.88□□□□□ -1.47
NFKB1P19838 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NFKB1P19838 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 HSPA8P14-201ENST00000552265 1805 ntBASIC5.88□□□□□ -1.47
NFKB1P19838 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.88□□□□□ -1.47
NFKB1P19838 AL049641.1-201ENST00000441055 1948 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
NFKB1P19838 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 RNU6-97P-201ENST00000363387 104 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 Y_RNA.212-201ENST00000364177 102 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 U3.11-201ENST00000364476 212 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms