Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL356057.3-201ENST00000402607 340 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HMGA1P17096 NDUFS5P3-201ENST00000450668 321 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 KC877373.1-201ENST00000479066 408 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 AC021146.5-201ENST00000503544 545 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGA1P17096 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HMGA1P17096 AL389895.1-201ENST00000554127 252 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGA1P17096 ZNF861P-201ENST00000588126 639 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGA1P17096 AL020991.1-201ENST00000612314 373 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 AP004607.9-201ENST00000618202 316 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGA1P17096 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGA1P17096 AC093908.1-201ENST00000623125 8092 ntBASIC2.86□□□□□ -1.95
HMGA1P17096 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGA1P17096 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA1P17096 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA1P17096 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA1P17096 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HMGA1P17096 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 AL031679.1-201ENST00000400616 525 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA1P17096 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA1P17096 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA1P17096 AL160175.1-201ENST00000428124 247 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 ARL5AP4-201ENST00000430731 512 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 FTH1P1-201ENST00000437933 532 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 AL592437.1-201ENST00000443781 492 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA1P17096 SLC31A1P1-201ENST00000451221 567 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA1P17096 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 AL035404.1-201ENST00000497982 568 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA1P17096 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.85□□□□□ -1.95
HMGA1P17096 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA1P17096 AC090819.1-201ENST00000523800 1111 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA1P17096 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA1P17096 MIR4298-201ENST00000584380 73 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 MIR6715B-201ENST00000637172 77 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA1P17096 GTF2H2B-203ENST00000508065 1432 ntBASIC2.85□□□□□ -1.95
HMGA1P17096 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA1P17096 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA1P17096 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA1P17096 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HMGA1P17096 FTLP6-201ENST00000355274 422 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA1P17096 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA1P17096 MIR196B-201ENST00000384852 84 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 MIR137-201ENST00000385223 102 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGA1P17096 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGA1P17096 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGA1P17096 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGA1P17096 RPS6P12-201ENST00000432491 726 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.84□□□□□ -1.95
HMGA1P17096 AC126389.1-201ENST00000477436 290 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA1P17096 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.84□□□□□ -1.95
HMGA1P17096 AC006116.7-201ENST00000590141 756 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 AL096803.3-201ENST00000609032 532 ntBASIC2.84□□□□□ -1.95
HMGA1P17096 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGA1P17096 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.84□□□□□ -1.96
HMGA1P17096 AL049780.3-201ENST00000624612 1583 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGA1P17096 TAB3P1-202ENST00000452645 1634 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HMGA1P17096 MTND5P19-201ENST00000424872 1794 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 U3.12-201ENST00000364498 214 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGA1P17096 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGA1P17096 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGA1P17096 RPS3P1-201ENST00000456781 192 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGA1P17096 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGA1P17096 AC092045.1-201ENST00000495716 1231 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HMGA1P17096 SNORA31.21-201ENST00000517180 77 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 OR4C2P-201ENST00000530855 1064 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 PDCL2P2-201ENST00000533651 189 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.83□□□□□ -1.96
HMGA1P17096 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGA1P17096 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGA1P17096 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGA1P17096 AC067852.7-201ENST00000623270 535 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms