Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP1P11387 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 CBX3P2-202ENST00000583365 535 ntBASIC3.95□□□□□ -1.78
TOP1P11387 MIR4276-201ENST00000584832 70 ntBASIC3.95□□□□□ -1.78
TOP1P11387 AC090425.2-201ENST00000608818 501 ntBASIC3.95□□□□□ -1.78
TOP1P11387 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP1P11387 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP1P11387 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP1P11387 AL513302.2-201ENST00000562313 1842 ntBASIC3.95□□□□□ -1.78
TOP1P11387 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 Z83843.1-201ENST00000604070 3685 ntBASIC3.94□□□□□ -1.78
TOP1P11387 AC058791.1-201ENST00000608412 3198 ntBASIC3.94□□□□□ -1.78
TOP1P11387 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TOP1P11387 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP1P11387 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP1P11387 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
TOP1P11387 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP1P11387 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TOP1P11387 SNORA7.2-201ENST00000364446 145 ntBASIC3.94□□□□□ -1.78
TOP1P11387 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP1P11387 RNA5SP120-201ENST00000410900 112 ntBASIC3.94□□□□□ -1.78
TOP1P11387 LINC01347-201ENST00000417964 355 ntBASIC3.94□□□□□ -1.78
TOP1P11387 RPL31P12-201ENST00000422587 358 ntBASIC3.94□□□□□ -1.78
TOP1P11387 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP1P11387 BX679664.1-201ENST00000434429 253 ntBASIC3.94□□□□□ -1.78
TOP1P11387 BTBD7P2-201ENST00000441962 620 ntBASIC3.94□□□□□ -1.78
TOP1P11387 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.94□□□□□ -1.78
TOP1P11387 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TOP1P11387 HMGB3P8-201ENST00000449709 577 ntBASIC3.94□□□□□ -1.78
TOP1P11387 AC097262.1-201ENST00000452559 548 ntBASIC3.94□□□□□ -1.78
TOP1P11387 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP1P11387 AC087312.1-201ENST00000471411 480 ntBASIC3.94□□□□□ -1.78
TOP1P11387 RPS4XP22-201ENST00000480755 780 ntBASIC3.94□□□□□ -1.78
TOP1P11387 RN7SKP96-201ENST00000516948 297 ntBASIC3.94□□□□□ -1.78
TOP1P11387 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP1P11387 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TOP1P11387 MTND5P21-201ENST00000531961 522 ntBASIC3.94□□□□□ -1.78
TOP1P11387 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.94□□□□□ -1.78
TOP1P11387 AC245128.3-201ENST00000594721 748 ntBASIC3.94□□□□□ -1.78
TOP1P11387 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
TOP1P11387 BX322635.1-201ENST00000605804 496 ntBASIC3.94□□□□□ -1.78
TOP1P11387 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP1P11387 MIR8058-201ENST00000615737 89 ntBASIC3.94□□□□□ -1.78
TOP1P11387 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP1P11387 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
TOP1P11387 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP1P11387 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TOP1P11387 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP1P11387 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TOP1P11387 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 Y_RNA.333-201ENST00000365274 102 ntBASIC3.93□□□□□ -1.78
TOP1P11387 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TOP1P11387 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 AC023128.2-201ENST00000420880 1223 ntBASIC3.93□□□□□ -1.78
TOP1P11387 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP1P11387 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP1P11387 AC097499.1-201ENST00000444277 208 ntBASIC3.93□□□□□ -1.78
TOP1P11387 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP1P11387 RPL6P9-201ENST00000466502 859 ntBASIC3.93□□□□□ -1.78
TOP1P11387 NCOR1P1-202ENST00000486162 291 ntBASIC3.93□□□□□ -1.78
TOP1P11387 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 MTND2P31-201ENST00000512602 616 ntBASIC3.93□□□□□ -1.78
TOP1P11387 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP1P11387 MTND2P7-201ENST00000521337 640 ntBASIC3.93□□□□□ -1.78
TOP1P11387 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP1P11387 PDCL2P2-201ENST00000533651 189 ntBASIC3.93□□□□□ -1.78
TOP1P11387 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP1P11387 AC005476.1-201ENST00000554427 397 ntBASIC3.93□□□□□ -1.78
TOP1P11387 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP1P11387 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP1P11387 AC011374.2-201ENST00000607135 526 ntBASIC3.93□□□□□ -1.78
TOP1P11387 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.93□□□□□ -1.78
TOP1P11387 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.93□□□□□ -1.78
TOP1P11387 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP1P11387 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP1P11387 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP1P11387 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TOP1P11387 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.93□□□□□ -1.78
TOP1P11387 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP1P11387 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP1P11387 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOP1P11387 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOP1P11387 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.92□□□□□ -1.78
TOP1P11387 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP1P11387 CR383658.2-201ENST00000547576 1525 ntBASIC3.92□□□□□ -1.78
TOP1P11387 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOP1P11387 OR52E6-202ENST00000379946 954 ntBASIC3.92□□□□□ -1.78
TOP1P11387 KRR1P1-201ENST00000419430 803 ntBASIC3.92□□□□□ -1.78
TOP1P11387 MTND2P16-201ENST00000419987 799 ntBASIC3.92□□□□□ -1.78
TOP1P11387 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.92□□□□□ -1.78
TOP1P11387 MTND2P21-201ENST00000436242 1042 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms