Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 OR8K2P-201ENST00000524645 927 ntBASIC2.75□□□□□ -1.97
CD28P10747 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.75□□□□□ -1.97
CD28P10747 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.75□□□□□ -1.97
CD28P10747 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.75□□□□□ -1.97
CD28P10747 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.75□□□□□ -1.97
CD28P10747 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.75□□□□□ -1.97
CD28P10747 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AC073569.3-201ENST00000619055 682 ntBASIC2.75□□□□□ -1.97
CD28P10747 AC006213.5-201ENST00000619673 288 ntBASIC2.75□□□□□ -1.97
CD28P10747 AP003355.3-201ENST00000623465 114 ntBASIC2.75□□□□□ -1.97
CD28P10747 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.75□□□□□ -1.97
CD28P10747 AC017104.5-201ENST00000637647 639 ntBASIC2.75□□□□□ -1.97
CD28P10747 OR6C71P-202ENST00000641886 1107 ntBASIC2.75□□□□□ -1.97
CD28P10747 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CD28P10747 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.75□□□□□ -1.97
CD28P10747 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CD28P10747 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD28P10747 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 SNORA11C-201ENST00000408532 129 ntBASIC2.74□□□□□ -1.97
CD28P10747 RNA5SP120-201ENST00000410900 112 ntBASIC2.74□□□□□ -1.97
CD28P10747 PTP4A1P5-201ENST00000420305 455 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC005019.1-201ENST00000436455 431 ntBASIC2.74□□□□□ -1.97
CD28P10747 CYCSP32-201ENST00000440548 321 ntBASIC2.74□□□□□ -1.97
CD28P10747 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 Z77249.1-201ENST00000444622 1175 ntBASIC2.74□□□□□ -1.97
CD28P10747 MTND1P33-201ENST00000446251 917 ntBASIC2.74□□□□□ -1.97
CD28P10747 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 TVP23BP2-201ENST00000455082 615 ntBASIC2.74□□□□□ -1.97
CD28P10747 CEACAMP4-201ENST00000457676 421 ntBASIC2.74□□□□□ -1.97
CD28P10747 U3.44-201ENST00000458938 192 ntBASIC2.74□□□□□ -1.97
CD28P10747 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.74□□□□□ -1.97
CD28P10747 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 AC015724.1-201ENST00000478577 156 ntBASIC2.74□□□□□ -1.97
CD28P10747 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 AC078817.1-201ENST00000492623 435 ntBASIC2.74□□□□□ -1.97
CD28P10747 AP001086.1-201ENST00000494882 321 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.74□□□□□ -1.97
CD28P10747 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.74□□□□□ -1.97
CD28P10747 RN7SKP277-201ENST00000516895 283 ntBASIC2.74□□□□□ -1.97
CD28P10747 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 OR8L1P-201ENST00000534005 955 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 AL442163.2-201ENST00000553912 710 ntBASIC2.74□□□□□ -1.97
CD28P10747 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 AC012254.4-201ENST00000588843 273 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.74□□□□□ -1.97
CD28P10747 Z82195.1-201ENST00000604558 398 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC097460.3-201ENST00000623099 442 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC097372.4-201ENST00000625025 466 ntBASIC2.74□□□□□ -1.97
CD28P10747 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CD28P10747 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CD28P10747 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD28P10747 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CD28P10747 MTCO1P24-201ENST00000515438 1558 ntBASIC2.74□□□□□ -1.97
CD28P10747 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CD28P10747 RPS4XP5-202ENST00000449995 1334 ntBASIC2.73□□□□□ -1.97
CD28P10747 OTUD4P1-201ENST00000237841 3067 ntBASIC2.73□□□□□ -1.97
CD28P10747 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CD28P10747 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.73□□□□□ -1.97
CD28P10747 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
CD28P10747 AL133383.2-201ENST00000622958 2336 ntBASIC2.73□□□□□ -1.97
CD28P10747 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CD28P10747 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CD28P10747 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CD28P10747 RNU6-356P-201ENST00000384140 107 ntBASIC2.73□□□□□ -1.97
CD28P10747 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.73□□□□□ -1.97
CD28P10747 ATP5F1P6-201ENST00000402768 767 ntBASIC2.73□□□□□ -1.97
CD28P10747 MTHFD2P2-201ENST00000407725 247 ntBASIC2.73□□□□□ -1.97
CD28P10747 Z98941.1-201ENST00000407764 100 ntBASIC2.73□□□□□ -1.97
CD28P10747 RNU4-27P-201ENST00000410889 139 ntBASIC2.73□□□□□ -1.97
CD28P10747 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.73□□□□□ -1.97
CD28P10747 RPS15AP40-201ENST00000419621 391 ntBASIC2.73□□□□□ -1.97
CD28P10747 AL606495.1-201ENST00000422100 813 ntBASIC2.73□□□□□ -1.97
CD28P10747 AC005300.1-201ENST00000428401 373 ntBASIC2.73□□□□□ -1.97
CD28P10747 AC005326.1-201ENST00000429197 123 ntBASIC2.73□□□□□ -1.97
CD28P10747 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.73□□□□□ -1.97
CD28P10747 RPL21P110-201ENST00000433345 446 ntBASIC2.73□□□□□ -1.97
CD28P10747 PTP4A1P3-201ENST00000433661 420 ntBASIC2.73□□□□□ -1.97
CD28P10747 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms