Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC004217.3-201ENST00000551552 878 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 EIF4BP1-201ENST00000554881 351 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC012493.2-201ENST00000595083 291 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC133794.1-201ENST00000602731 914 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 YPEL5P2-201ENST00000605553 359 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC116312.1-201ENST00000606841 314 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AP004247.3-201ENST00000608682 624 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC018645.2-201ENST00000609151 472 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC005156.1-201ENST00000613371 573 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AL355365.1-201ENST00000616480 294 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFBP01127 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PDGFBP01127 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFBP01127 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PDGFBP01127 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC004944.1-201ENST00000517807 3059 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 MTND4P9-201ENST00000507819 1346 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AL355578.1-201ENST00000607405 1328 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFBP01127 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
PDGFBP01127 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
PDGFBP01127 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 RNU1-33P-201ENST00000364249 162 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 AL121972.1-201ENST00000402023 252 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AL024507.1-201ENST00000412741 274 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 MTND4P22-201ENST00000413116 1169 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFBP01127 EIF4EP1-201ENST00000422311 642 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AC233981.1-201ENST00000423224 461 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFBP01127 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 AL512649.1-201ENST00000428997 581 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 RPL21P112-201ENST00000434403 463 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 RAB11AP1-201ENST00000442978 646 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFBP01127 RPL26P28-201ENST00000451325 435 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFBP01127 RN7SL429P-201ENST00000479090 223 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 RN7SL489P-201ENST00000486185 223 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 RN7SL327P-201ENST00000488659 223 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 RPS6P4-201ENST00000494693 758 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PDGFBP01127 AC026784.1-201ENST00000507986 352 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 GNRHR2P1-201ENST00000555315 631 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AP005205.1-201ENST00000563503 508 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 AC079171.1-201ENST00000568788 914 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 OR4G1P-201ENST00000588632 938 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFBP01127 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFBP01127 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFBP01127 RN7SL853P-201ENST00000617250 223 ntBASIC3.86□□□□□ -1.79
PDGFBP01127 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFBP01127 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC233263.6-201ENST00000631132 1963 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC007823.1-201ENST00000569932 1566 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.85□□□□□ -1.79
PDGFBP01127 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFBP01127 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 SNORA7.2-201ENST00000364446 145 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC234772.1-201ENST00000377927 937 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 OR51A3P-201ENST00000413596 924 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 BX842559.1-201ENST00000419615 532 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 HMGB1P45-201ENST00000435986 653 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms