Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 VN1R82P-201ENST00000601481 356 ntBASIC3.93□□□□□ -1.78
TO15178 AL158042.1-201ENST00000605338 460 ntBASIC3.93□□□□□ -1.78
TO15178 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.93□□□□□ -1.78
TO15178 AP001521.1-201ENST00000609150 300 ntBASIC3.93□□□□□ -1.78
TO15178 OR6C71P-202ENST00000641886 1107 ntBASIC3.93□□□□□ -1.78
TO15178 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TO15178 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TO15178 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TO15178 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TO15178 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.92□□□□□ -1.78
TO15178 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.92□□□□□ -1.78
TO15178 AF228730.1-201ENST00000397972 663 ntBASIC3.92□□□□□ -1.78
TO15178 RNA5SP36-201ENST00000410197 133 ntBASIC3.92□□□□□ -1.78
TO15178 RPL23AP26-201ENST00000412728 464 ntBASIC3.92□□□□□ -1.78
TO15178 AMD1P2-201ENST00000412936 992 ntBASIC3.92□□□□□ -1.78
TO15178 MTND4P22-201ENST00000413116 1169 ntBASIC3.92□□□□□ -1.78
TO15178 RPS23P10-201ENST00000416185 486 ntBASIC3.92□□□□□ -1.78
TO15178 TIMM9P2-201ENST00000419324 266 ntBASIC3.92□□□□□ -1.78
TO15178 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 CHIAP3-201ENST00000423668 1133 ntBASIC3.92□□□□□ -1.78
TO15178 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 MTND1P32-201ENST00000433043 938 ntBASIC3.92□□□□□ -1.78
TO15178 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.92□□□□□ -1.78
TO15178 MTND1P31-201ENST00000449206 961 ntBASIC3.92□□□□□ -1.78
TO15178 AC009220.1-201ENST00000451614 275 ntBASIC3.92□□□□□ -1.78
TO15178 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 AC079804.1-201ENST00000461922 436 ntBASIC3.92□□□□□ -1.78
TO15178 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
TO15178 AC078918.1-201ENST00000498515 228 ntBASIC3.92□□□□□ -1.78
TO15178 AC005921.1-201ENST00000510589 286 ntBASIC3.92□□□□□ -1.78
TO15178 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
TO15178 RNA5SP519-201ENST00000516480 119 ntBASIC3.92□□□□□ -1.78
TO15178 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.92□□□□□ -1.78
TO15178 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 DUXAP5-201ENST00000529668 529 ntBASIC3.92□□□□□ -1.78
TO15178 OR4A45P-201ENST00000529954 901 ntBASIC3.92□□□□□ -1.78
TO15178 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.92□□□□□ -1.78
TO15178 SLC2A13P1-201ENST00000531560 322 ntBASIC3.92□□□□□ -1.78
TO15178 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TO15178 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.92□□□□□ -1.78
TO15178 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.92□□□□□ -1.78
TO15178 AC125611.1-201ENST00000549563 229 ntBASIC3.92□□□□□ -1.78
TO15178 AC107016.1-201ENST00000550463 337 ntBASIC3.92□□□□□ -1.78
TO15178 AL389895.1-201ENST00000554127 252 ntBASIC3.92□□□□□ -1.78
TO15178 DUXAP1-201ENST00000556632 463 ntBASIC3.92□□□□□ -1.78
TO15178 MIR4644-201ENST00000579929 84 ntBASIC3.92□□□□□ -1.78
TO15178 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.92□□□□□ -1.78
TO15178 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.92□□□□□ -1.78
TO15178 MIR3138-201ENST00000585238 82 ntBASIC3.92□□□□□ -1.78
TO15178 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.92□□□□□ -1.78
TO15178 AL161729.3-201ENST00000603533 673 ntBASIC3.92□□□□□ -1.78
TO15178 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 AC092184.1-201ENST00000625042 715 ntBASIC3.92□□□□□ -1.78
TO15178 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TO15178 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.92□□□□□ -1.78
TO15178 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TO15178 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.91□□□□□ -1.78
TO15178 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TO15178 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
TO15178 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 AC126755.2-208ENST00000327792 462 ntBASIC3.91□□□□□ -1.78
TO15178 AC138969.1-213ENST00000331436 462 ntBASIC3.91□□□□□ -1.78
TO15178 RNA5SP189-201ENST00000364920 115 ntBASIC3.91□□□□□ -1.78
TO15178 RNU6-657P-201ENST00000383904 107 ntBASIC3.91□□□□□ -1.78
TO15178 RNU6-1122P-201ENST00000384449 107 ntBASIC3.91□□□□□ -1.78
TO15178 MIR141-201ENST00000384975 95 ntBASIC3.91□□□□□ -1.78
TO15178 OR6C69P-201ENST00000394268 893 ntBASIC3.91□□□□□ -1.78
TO15178 AC068533.2-201ENST00000411872 306 ntBASIC3.91□□□□□ -1.78
TO15178 AC016397.1-201ENST00000412463 242 ntBASIC3.91□□□□□ -1.78
TO15178 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.91□□□□□ -1.78
TO15178 AC104454.1-201ENST00000421341 1401 ntBASIC3.91□□□□□ -1.78
TO15178 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.91□□□□□ -1.78
TO15178 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 CETN4P-201ENST00000432407 469 ntBASIC3.91□□□□□ -1.78
TO15178 BTF3P10-201ENST00000433415 495 ntBASIC3.91□□□□□ -1.78
TO15178 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 MTND2P20-201ENST00000440805 661 ntBASIC3.91□□□□□ -1.78
TO15178 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.91□□□□□ -1.78
TO15178 AL590399.6-201ENST00000446396 307 ntBASIC3.91□□□□□ -1.78
TO15178 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
TO15178 OR4G11P-201ENST00000492842 939 ntBASIC3.91□□□□□ -1.78
TO15178 AC068305.1-201ENST00000497406 726 ntBASIC3.91□□□□□ -1.78
TO15178 AC104090.1-201ENST00000506341 1171 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms