Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 HMGB1P12-201ENST00000438594 598 ntBASIC2.75□□□□□ -1.97
UPK2O00526 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK2O00526 RRM2P4-201ENST00000441721 562 ntBASIC2.75□□□□□ -1.97
UPK2O00526 NOTCH2P1-201ENST00000443481 624 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AL035407.2-201ENST00000454090 378 ntBASIC2.75□□□□□ -1.97
UPK2O00526 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK2O00526 HMGN1P18-201ENST00000457642 277 ntBASIC2.75□□□□□ -1.97
UPK2O00526 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK2O00526 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK2O00526 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK2O00526 AC133963.2-201ENST00000513686 578 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK2O00526 HIGD1AP5-201ENST00000529959 259 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AC004024.1-201ENST00000549244 247 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AL389895.1-201ENST00000554127 252 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK2O00526 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK2O00526 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK2O00526 AC067852.3-201ENST00000589177 561 ntBASIC2.75□□□□□ -1.97
UPK2O00526 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK2O00526 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK2O00526 AC006557.5-201ENST00000603126 811 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AC005972.3-201ENST00000606304 481 ntBASIC2.75□□□□□ -1.97
UPK2O00526 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK2O00526 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.75□□□□□ -1.97
UPK2O00526 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK2O00526 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK2O00526 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UPK2O00526 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPK2O00526 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK2O00526 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK2O00526 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.75□□□□□ -1.97
UPK2O00526 AC138915.3-201ENST00000562908 1389 ntBASIC2.74□□□□□ -1.97
UPK2O00526 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPK2O00526 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPK2O00526 SEC63P2-201ENST00000503863 1939 ntBASIC2.74□□□□□ -1.97
UPK2O00526 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPK2O00526 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPK2O00526 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
UPK2O00526 RNU6-1226P-201ENST00000384317 107 ntBASIC2.74□□□□□ -1.97
UPK2O00526 RNU6-883P-201ENST00000384597 107 ntBASIC2.74□□□□□ -1.97
UPK2O00526 EI24P2-201ENST00000397776 1076 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AL583834.1-201ENST00000406943 343 ntBASIC2.74□□□□□ -1.97
UPK2O00526 RN7SKP263-201ENST00000411194 309 ntBASIC2.74□□□□□ -1.97
UPK2O00526 RNA5SP107-201ENST00000411358 122 ntBASIC2.74□□□□□ -1.97
UPK2O00526 RPL31P2-201ENST00000413849 377 ntBASIC2.74□□□□□ -1.97
UPK2O00526 Z99755.1-201ENST00000414048 380 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.74□□□□□ -1.97
UPK2O00526 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.74□□□□□ -1.97
UPK2O00526 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 FABP5P3-201ENST00000437960 408 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.74□□□□□ -1.97
UPK2O00526 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 SLC31A1P1-201ENST00000451221 567 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK2O00526 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK2O00526 AC010468.1-201ENST00000461022 817 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC010285.1-201ENST00000470580 392 ntBASIC2.74□□□□□ -1.97
UPK2O00526 RN7SL442P-201ENST00000473804 320 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 HMGB1P22-201ENST00000505315 124 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.74□□□□□ -1.97
UPK2O00526 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.74□□□□□ -1.97
UPK2O00526 AP001207.1-201ENST00000524051 481 ntBASIC2.74□□□□□ -1.97
UPK2O00526 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK2O00526 AC109635.4-202ENST00000531666 412 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK2O00526 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK2O00526 AC008507.1-201ENST00000587506 734 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC011492.1-201ENST00000600023 315 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC005229.3-201ENST00000603438 323 ntBASIC2.74□□□□□ -1.97
UPK2O00526 BX323046.1-201ENST00000610145 535 ntBASIC2.74□□□□□ -1.97
UPK2O00526 FRG1HP-204ENST00000617940 757 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC073569.3-201ENST00000619055 682 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC068724.3-201ENST00000625906 87 ntBASIC2.74□□□□□ -1.97
UPK2O00526 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK2O00526 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK2O00526 MTND5P11-201ENST00000511037 1812 ntBASIC2.74□□□□□ -1.97
UPK2O00526 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPK2O00526 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.73□□□□□ -1.97
UPK2O00526 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK2O00526 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK2O00526 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.73□□□□□ -1.97
UPK2O00526 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK2O00526 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK2O00526 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK2O00526 MT-TC-201ENST00000387405 66 ntBASIC2.73□□□□□ -1.97
UPK2O00526 RPL21P17-201ENST00000397467 475 ntBASIC2.73□□□□□ -1.97
UPK2O00526 AL121972.1-201ENST00000402023 252 ntBASIC2.73□□□□□ -1.97
UPK2O00526 RNU2-71P-201ENST00000411395 189 ntBASIC2.73□□□□□ -1.97
UPK2O00526 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK2O00526 AC114973.1-201ENST00000429057 632 ntBASIC2.73□□□□□ -1.97
UPK2O00526 CYCSP4-201ENST00000429682 331 ntBASIC2.73□□□□□ -1.97
UPK2O00526 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK2O00526 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK2O00526 RPS15AP29-201ENST00000445539 400 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms