Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 MTCO1P30-201ENST00000515244 580 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RNU6-276P-201ENST00000516114 96 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RNA5SP208-201ENST00000516156 78 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RNA5SP309-201ENST00000516670 106 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 SNORA48.10-201ENST00000516965 160 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AP004242.1-201ENST00000533701 349 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC28A1O00337 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC28A1O00337 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC069366.1-201ENST00000583159 838 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AL669831.4-202ENST00000590817 238 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC28A1O00337 VN1R79P-201ENST00000593540 513 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC096947.1-201ENST00000603233 470 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AL049634.3-201ENST00000604968 457 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AC023043.4-201ENST00000612081 449 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 MIR6500-201ENST00000622700 86 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC28A1O00337 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
SLC28A1O00337 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 FAM91A3P-201ENST00000456826 2544 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC28A1O00337 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 Z99496.1-201ENST00000469424 1477 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 RNU6-263P-201ENST00000363811 107 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SLC28A1O00337 SNORA70C-201ENST00000384538 135 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 RNU6-1300P-201ENST00000391046 108 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 RNU6-837P-201ENST00000391056 108 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 RNA5SP56-201ENST00000410277 118 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 KRR1P1-201ENST00000419430 803 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AL513174.1-201ENST00000423182 629 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 SDCBPP2-201ENST00000424643 885 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 KCTD10P1-201ENST00000434203 625 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC28A1O00337 AL138799.3-201ENST00000438968 350 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 MTCO1P48-201ENST00000448024 1096 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 NPM1P49-201ENST00000448027 714 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 RPL7P19-201ENST00000469948 618 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC022034.3-201ENST00000471393 478 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC093752.1-206ENST00000511823 336 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC28A1O00337 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AL121766.1-201ENST00000547436 487 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AC120057.2-201ENST00000571520 271 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC28A1O00337 SNRPGP15-201ENST00000600149 222 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC015726.1-201ENST00000602353 681 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AL163642.2-201ENST00000604722 1019 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AL158050.2-201ENST00000605336 568 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 SNORA62.6-201ENST00000606322 83 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC092954.1-201ENST00000609121 445 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC28A1O00337 AL391261.4-201ENST00000616012 481 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 AC104985.3-201ENST00000623479 597 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 OR6C71P-202ENST00000641886 1107 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC28A1O00337 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
SLC28A1O00337 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC28A1O00337 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SLC28A1O00337 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC28A1O00337 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SLC28A1O00337 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms