Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL157817.1-201ENST00000614264 790 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR7973-1-201ENST00000614683 76 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR6500-201ENST00000622700 86 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.65□□□□□ -2.14
CHKB-CPT1BH3BT56 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 U3.25-201ENST00000391209 220 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 RN7SKP33-201ENST00000410942 340 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 NUP35P2-201ENST00000416748 943 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL591419.1-201ENST00000427423 339 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC092427.1-202ENST00000430569 476 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 VN1R34P-201ENST00000447387 883 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 RPL21P41-201ENST00000459863 264 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS4XP15-201ENST00000489210 795 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010285.3-201ENST00000511668 676 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 RN7SKP92-201ENST00000517266 244 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AP000676.2-201ENST00000529711 301 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 CSNK1A1P1-202ENST00000563423 981 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 NDUFA5P11-201ENST00000567995 343 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC012182.1-201ENST00000570133 895 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC006116.5-201ENST00000591936 559 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 PCNAP1-202ENST00000595299 752 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC008687.2-201ENST00000597865 520 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC012213.4-201ENST00000606457 354 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC099676.1-201ENST00000608886 657 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AC084036.1-201ENST00000609190 508 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 AL020991.1-201ENST00000612314 373 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 RMST_5.1-201ENST00000618704 126 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 CR383658.2-201ENST00000547576 1525 ntBASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHKB-CPT1BH3BT56 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 TANK-205ENST00000405852 2155 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 ZNF37BP-203ENST00000452306 1352 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR6073-201ENST00000352083 89 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RNU6-666P-201ENST00000363499 107 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 TAS2R15P-201ENST00000390674 928 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS3AP23-201ENST00000401762 784 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AL389915.1-201ENST00000422463 466 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AL353678.1-201ENST00000422735 741 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS27AP7-201ENST00000422792 455 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RPL7P37-201ENST00000425095 738 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 CR769767.1-201ENST00000436337 346 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC091862.1-201ENST00000438016 1100 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS3AP41-201ENST00000462701 778 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 PRDX3P4-201ENST00000470828 747 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RBM43P1-201ENST00000476891 1081 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS4XP6-201ENST00000477670 797 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RN7SL323P-201ENST00000494712 295 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 OR7H2P-201ENST00000513483 306 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RNU6ATAC24P-201ENST00000516811 135 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP402-201ENST00000517148 110 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 CYCSP30-201ENST00000546447 172 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 PRELID2P1-201ENST00000552837 301 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms