Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC010401.1-201ENST00000463867 348 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 RN7SKP283-201ENST00000517197 270 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AL358913.1-201ENST00000554342 121 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC009159.1-201ENST00000618386 642 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC093010.3-201ENST00000570269 15214 ntBASIC3.65□□□□□ -1.82
RGPD3A6NKT7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.65□□□□□ -1.82
RGPD3A6NKT7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 AL365361.1-201ENST00000566942 3481 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 RNA5SP289-201ENST00000362332 137 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 SNORA3.2-201ENST00000408221 125 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 RNA5SP425-201ENST00000410336 112 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 RNA5SP282-201ENST00000516355 108 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 AC078899.3-201ENST00000599065 212 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 AC073476.4-201ENST00000628409 72 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 CTSLP2-204ENST00000629029 392 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 AC093775.1-201ENST00000624154 1868 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 AC012020.1-201ENST00000624541 1728 ntBASIC3.65□□□□□ -1.83
RGPD3A6NKT7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RGPD3A6NKT7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AL138827.1-201ENST00000402666 306 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AL590290.1-201ENST00000405336 380 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 SNORA79B-201ENST00000410557 148 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 RPL30P2-201ENST00000414021 291 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 RN7SKP244-201ENST00000516513 307 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AC007954.1-201ENST00000554198 494 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AL592295.2-201ENST00000612578 206 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AC004925.1-201ENST00000624256 2706 ntBASIC3.64□□□□□ -1.83
RGPD3A6NKT7 AC009963.1-201ENST00000417265 157 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC091903.1-201ENST00000624322 454 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC008264.2-201ENST00000610193 3731 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 MIR708-201ENST00000390708 88 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 RNU6-482P-201ENST00000391068 107 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 RPL31P12-201ENST00000422587 358 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC025754.2-201ENST00000606491 432 ntBASIC3.63□□□□□ -1.83
RGPD3A6NKT7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RGPD3A6NKT7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 ATF1P1-201ENST00000406040 927 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 RPL7P10-201ENST00000417407 739 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 KLHL2P1-201ENST00000508691 521 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 VWA8P1-201ENST00000510889 176 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 RNA5SP217-201ENST00000515959 91 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
RGPD3A6NKT7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RGPD3A6NKT7 AC110754.1-201ENST00000399740 601 ntBASIC3.61□□□□□ -1.83
RGPD3A6NKT7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.61□□□□□ -1.83
RGPD3A6NKT7 HMGB3P11-201ENST00000440127 604 ntBASIC3.61□□□□□ -1.83
RGPD3A6NKT7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.61□□□□□ -1.83
RGPD3A6NKT7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.61□□□□□ -1.83
RGPD3A6NKT7 AC108210.2-201ENST00000503681 201 ntBASIC3.61□□□□□ -1.83
RGPD3A6NKT7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
RGPD3A6NKT7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RGPD3A6NKT7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms