Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AC123786.2-201ENST00000603459 275 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 SUMO2P15-201ENST00000604285 278 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AL161729.4-201ENST00000604650 476 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 RPSAP73-201ENST00000614820 330 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AC072046.2-201ENST00000618366 268 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AC090527.3-201ENST00000619041 548 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 AL157786.1-207ENST00000627771 695 ntBASIC5.33□□□□□ -1.56
CCDC66A2RUB6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC66A2RUB6 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RPL23AP57-201ENST00000332361 466 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RNU5E-4P-201ENST00000364931 120 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RAP1BP3-201ENST00000407180 549 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AL023807.1-201ENST00000407932 359 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 Y_RNA.608-201ENST00000410647 95 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RPL6P29-201ENST00000414863 865 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AL590609.2-201ENST00000421430 368 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AL355433.1-201ENST00000422804 300 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC096632.1-201ENST00000427395 310 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RPL36P19-201ENST00000430744 301 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 HIGD1AP8-201ENST00000453927 274 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 Z82190.1-201ENST00000454534 490 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC090142.1-201ENST00000465776 462 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 RPL23AP2-201ENST00000471227 466 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC112204.1-201ENST00000502591 103 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 PRDX4P1-201ENST00000507189 574 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC024589.1-201ENST00000512207 263 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 OR5AP1P-201ENST00000529730 940 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 LARP7P2-201ENST00000575306 125 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 CYCSP40-201ENST00000575927 294 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AL158209.2-201ENST00000619266 216 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC005086.4-201ENST00000623065 213 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AP000756.2-201ENST00000624168 2567 ntBASIC5.32□□□□□ -1.56
CCDC66A2RUB6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC66A2RUB6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 DHX9P1-201ENST00000436565 3076 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 MIR600-201ENST00000385007 98 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 RNU6-952P-201ENST00000391164 108 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 EIF5P1-201ENST00000400019 1231 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 DHFRP6-201ENST00000401776 268 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 TPMTP2-201ENST00000414372 726 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC004552.1-201ENST00000419089 348 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 CKS1BP6-201ENST00000424932 240 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 CFL1P1-202ENST00000432948 411 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 PSPHP1-201ENST00000450062 261 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 BTF3P5-201ENST00000457252 467 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 RPL31P58-201ENST00000469001 379 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AL121769.1-201ENST00000469473 401 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 RPS26P3-201ENST00000470205 348 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC090543.2-201ENST00000483963 348 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC004057.1-201ENST00000485827 348 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms