Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RN7SL339P-201ENST00000580597 296 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC069431.2-201ENST00000604149 1099 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC073387.2-201ENST00000604797 784 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 HSPE1P14-201ENST00000605812 302 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC084824.4-201ENST00000620106 731 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC098679.5-201ENST00000624394 571 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 OR5BE1P-202ENST00000641168 1176 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AL359893.1-201ENST00000447628 1580 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC117529.2-201ENST00000512159 2068 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 GABPAP-201ENST00000419271 1356 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 OR4A15-201ENST00000314706 1035 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ANKRD36P1-201ENST00000344424 659 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 SNORA7.2-201ENST00000364446 145 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 RNA5SP22-201ENST00000365393 109 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 SNORA9-201ENST00000384215 133 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR93-201ENST00000385024 80 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 BTF3P8-201ENST00000414577 526 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC004552.1-201ENST00000419089 348 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC241584.1-201ENST00000438469 1241 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC006011.1-201ENST00000442758 349 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS3AP12-201ENST00000443616 753 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 TRBV26-201ENST00000456572 344 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL36AP13-201ENST00000457490 317 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS26P3-201ENST00000470205 348 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC010301.1-201ENST00000473936 355 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC090543.2-201ENST00000483963 348 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL31P13-201ENST00000484151 370 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC090013.1-201ENST00000485147 480 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC004057.1-201ENST00000485827 348 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 PRELID3BP6-201ENST00000503839 571 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC091516.1-201ENST00000549191 703 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC007179.3-201ENST00000604976 235 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC019278.1-201ENST00000623516 479 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC009093.8-201ENST00000641769 292 ntBASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA1Q9Y5H4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNVU1-3-201ENST00000364313 161 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 SNORA51.2-201ENST00000364595 132 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU6-921P-201ENST00000384361 107 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR34B-201ENST00000385076 84 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNA5SP104-201ENST00000410989 118 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNA5SP39-201ENST00000411245 120 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL23AP16-201ENST00000441715 421 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 MTCYBP42-201ENST00000444653 1130 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 snoU109.3-201ENST00000459477 145 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL29P14-201ENST00000495837 428 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 TRAV31-201ENST00000502780 342 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 KLRA1P-201ENST00000503499 986 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms