Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.84□□□□□ -1.63
PCDHB1Q9Y5F3 AC015908.5-201ENST00000623289 343 ntBASIC4.84□□□□□ -1.63
PCDHB1Q9Y5F3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHB1Q9Y5F3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHB1Q9Y5F3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 AC099654.2-201ENST00000433031 1980 ntBASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHB1Q9Y5F3 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL672167.1-204ENST00000641875 3017 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 RNY4P24-201ENST00000362735 96 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 RN7SKP33-201ENST00000410942 340 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 HMGN1P14-201ENST00000412459 517 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 TBCAP2-201ENST00000416175 326 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL358176.3-201ENST00000420757 454 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 OR2AH1P-201ENST00000425717 928 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 OR2B8P-201ENST00000432841 938 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC093414.1-201ENST00000434712 514 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 RPS20P1-201ENST00000434853 354 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 USP9YP12-201ENST00000450481 570 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC104073.1-201ENST00000451988 151 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 TPT1P7-201ENST00000458300 517 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 snoU13.1-201ENST00000459157 104 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 RPS23P7-201ENST00000466210 444 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC104763.1-201ENST00000475274 360 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC111000.3-201ENST00000508057 576 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AF131216.2-201ENST00000512316 564 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 PAICSP4-201ENST00000517543 1253 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 COX6CP8-201ENST00000522620 226 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 OR5AP1P-201ENST00000529730 940 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 MIR4528-201ENST00000577763 90 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 MIR4801-201ENST00000582704 82 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 BNIP3P8-201ENST00000597863 560 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL355073.2-201ENST00000612106 557 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL589743.7-201ENST00000612637 233 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC116165.2-201ENST00000616705 206 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 FAM157B-203ENST00000639350 358 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AC021242.1-201ENST00000507315 2035 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 AL359922.3-201ENST00000624779 1670 ntBASIC4.83□□□□□ -1.64
PCDHB1Q9Y5F3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL450326.2-201ENST00000421913 1962 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC090971.4-201ENST00000560291 1800 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 OR11H4-201ENST00000315409 1082 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RNU6-289P-201ENST00000364093 107 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 SNORA70.2-201ENST00000364506 135 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RNU6-348P-201ENST00000384386 107 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 SNORA68.2-201ENST00000391263 128 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL357515.1-201ENST00000402967 542 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 BTBD10P2-201ENST00000404779 676 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 Y_RNA.604-201ENST00000410574 102 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RNU2-66P-201ENST00000410650 161 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RN7SKP100-201ENST00000411258 284 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms