Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 HMGN1P15-201ENST00000513870 295 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC008494.2-201ENST00000514544 370 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 MTCO1P30-201ENST00000515244 580 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 FABP5P12-201ENST00000515543 389 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 RNU1-95P-201ENST00000516357 160 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 RNU1-128P-201ENST00000516704 160 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC104027.1-201ENST00000521887 300 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 ATP5F1P7-201ENST00000567330 760 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC010591.1-201ENST00000603941 649 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC105429.2-201ENST00000610567 517 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 MIR7851-201ENST00000610611 160 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC006249.1-201ENST00000621223 471 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AP003400.6-201ENST00000624698 740 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC092326.2-201ENST00000624772 1561 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC132825.7-201ENST00000638744 335 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 USP8P1-201ENST00000494673 3183 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 SNORD3H-201ENST00000384486 214 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC025750.1-201ENST00000399891 379 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 RAB9AP3-201ENST00000412737 573 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL133547.1-201ENST00000448546 220 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 RAB9AP1-201ENST00000449393 573 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 RPL23AP62-201ENST00000463396 453 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL049829.1-201ENST00000465411 156 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 TRAV31-201ENST00000502780 342 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 KCTD9P5-201ENST00000504141 1170 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 HMGB1P23-201ENST00000518743 568 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC010306.1-201ENST00000523223 1117 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AL357559.1-201ENST00000622228 274 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 AC093875.1-201ENST00000623688 504 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 OTUD4P1-201ENST00000237841 3067 ntBASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC4Q9Y296 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.89
TRAPPC4Q9Y296 AC007823.1-201ENST00000569932 1566 ntBASIC3.21□□□□□ -1.89
TRAPPC4Q9Y296 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 ZNF285B-201ENST00000561698 1767 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 SNORD9-201ENST00000362566 104 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 SNORA63.3-201ENST00000362682 132 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RNU6-1339P-201ENST00000363574 91 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RNU6-354P-201ENST00000383862 107 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RNU6-610P-201ENST00000384264 107 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 PTMAP5-201ENST00000393073 333 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RPL22P22-201ENST00000395439 379 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AP002784.2-201ENST00000397300 549 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC004022.2-201ENST00000413824 193 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 CYCSP4-201ENST00000429682 331 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC018644.1-201ENST00000429934 551 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 ELOCP11-201ENST00000436690 332 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC006994.1-201ENST00000438212 839 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 ELOCP16-201ENST00000444494 332 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms