Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC010265.1-201ENST00000513509 211 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 SNORA67.7-201ENST00000516664 135 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 OR6C73P-201ENST00000546432 358 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC010198.2-201ENST00000550612 259 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AL365400.2-201ENST00000605604 902 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC006133.1-201ENST00000617106 264 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC092184.1-201ENST00000625042 715 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC007256.1-201ENST00000392253 2765 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 SNORA48.8-201ENST00000391324 134 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC069157.1-201ENST00000421749 137 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 PRDX3P4-201ENST00000470828 747 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 DUXAP2-201ENST00000519198 589 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 SYF2P1-201ENST00000550658 413 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 ZNF415P1-201ENST00000582279 1166 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AL392112.1-201ENST00000605115 829 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC005156.1-201ENST00000613371 573 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AC018816.2-201ENST00000621460 353 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 AL356490.1-201ENST00000623079 479 ntBASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS29Q9UBQ0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 RNU6-600P-201ENST00000362524 99 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AL583834.1-201ENST00000406943 343 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 OR2AS1P-201ENST00000427827 319 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 RPL37P1-201ENST00000432310 284 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AL353705.1-201ENST00000433468 480 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC006994.1-201ENST00000438212 839 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC108734.1-201ENST00000439549 399 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 SNORA84-201ENST00000459229 133 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 RPS4XP13-201ENST00000483219 789 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC093278.1-201ENST00000494700 600 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC108120.2-201ENST00000512973 294 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC010735.1-201ENST00000567305 1026 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC245389.1-201ENST00000605141 529 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 HMGN2P28-201ENST00000606102 262 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AL354976.1-201ENST00000613843 387 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 AC015967.1-201ENST00000619893 476 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 U6.105-201ENST00000637379 88 ntBASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS29Q9UBQ0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
VPS29Q9UBQ0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 RNA5SP295-201ENST00000362655 121 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 RNU6-31P-201ENST00000384388 108 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms