Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 RPL21P132-201ENST00000331267 462 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 RNU6-1151P-201ENST00000384684 107 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 RPS3AP23-201ENST00000401762 784 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL049697.2-201ENST00000403708 294 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 ARL4AP5-201ENST00000404372 599 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 RPL21P108-201ENST00000413857 481 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 MTCYBP38-201ENST00000417160 1123 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 BOLA3P4-201ENST00000418151 400 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC009480.2-201ENST00000422916 432 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 RPL7P57-201ENST00000423238 740 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 EIF4HP2-201ENST00000424380 563 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 OR2B8P-201ENST00000432841 938 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 USP9YP35-201ENST00000435696 412 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 UBE2FP3-201ENST00000436366 524 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 MTND2P20-201ENST00000440805 661 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 MRPL48P1-201ENST00000445390 636 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 COX6CP12-201ENST00000446748 202 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 RPL9P33-201ENST00000484311 566 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 SNX5P1-201ENST00000505757 1041 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 STMN1P2-201ENST00000508435 439 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC027309.2-201ENST00000520566 192 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 MTCYBP41-201ENST00000528913 1123 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 OR5M2P-201ENST00000529003 936 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL139174.1-201ENST00000531489 886 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL121834.1-201ENST00000572284 509 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC068790.4-201ENST00000602474 263 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 MIR6758-201ENST00000620653 63 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 MIR7703-201ENST00000620784 77 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AL356266.1-201ENST00000623311 483 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.74□□□□□ -1.65
DKK3Q9UBP4 LINC00561-201ENST00000565815 2738 ntBASIC4.74□□□□□ -1.65
DKK3Q9UBP4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 DHX40P1-201ENST00000588725 1412 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 OR4K15-201ENST00000305051 1216 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 FGF7P2-201ENST00000332473 296 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 RNA5SP88-201ENST00000365560 109 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 RNA5SP397-201ENST00000391323 118 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AP000580.1-201ENST00000404439 358 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 RNU6-272P-201ENST00000411028 104 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AC004448.2-201ENST00000422360 586 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 CKS1BP6-201ENST00000424932 240 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 LARP1BP3-201ENST00000437229 869 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AL031663.1-201ENST00000437445 219 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AC010469.1-201ENST00000463864 576 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 RPL21P71-201ENST00000465598 459 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 OR52A4P-201ENST00000472867 958 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 RPL12P20-201ENST00000475538 479 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 AP000926.1-201ENST00000479573 241 ntBASIC4.73□□□□□ -1.65
DKK3Q9UBP4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms