Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 AP001005.3-201ENST00000622049 129 ntBASIC6.01□□□□□ -1.45
CNTN3Q9P232 AC138305.3-201ENST00000624988 240 ntBASIC6.01□□□□□ -1.45
CNTN3Q9P232 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 CYP3A51P-201ENST00000633513 256 ntBASIC6.01□□□□□ -1.45
CNTN3Q9P232 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.01□□□□□ -1.45
CNTN3Q9P232 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.01□□□□□ -1.45
CNTN3Q9P232 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CNTN3Q9P232 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CNTN3Q9P232 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CNTN3Q9P232 Y_RNA.145-201ENST00000363527 102 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 Y_RNA.231-201ENST00000364358 102 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 RNU4-48P-201ENST00000365559 182 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6□□□□□ -1.45
CNTN3Q9P232 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
CNTN3Q9P232 RNU6-43P-201ENST00000384302 107 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 AC009804.1-201ENST00000400949 179 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 Z93019.1-201ENST00000416450 973 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 AL451054.2-201ENST00000420896 202 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 BEND7P1-201ENST00000422058 457 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 BX510359.3-201ENST00000422168 306 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 CFL1P1-202ENST00000432948 411 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 MTND3P2-201ENST00000438452 342 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC005297.2-201ENST00000450430 606 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 PPP1R2P5-201ENST00000457256 603 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 RN7SL51P-201ENST00000468230 285 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC090096.1-201ENST00000489168 390 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 RPS17P5-201ENST00000498293 408 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC068790.3-201ENST00000602988 553 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6□□□□□ -1.45
CNTN3Q9P232 AC123768.4-201ENST00000616244 701 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 RNA5SP439-201ENST00000617595 124 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CNTN3Q9P232 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CNTN3Q9P232 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6□□□□□ -1.45
CNTN3Q9P232 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6□□□□□ -1.45
CNTN3Q9P232 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6□□□□□ -1.45
CNTN3Q9P232 AC020656.2-201ENST00000613291 5309 ntBASIC6□□□□□ -1.45
CNTN3Q9P232 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 RNA5SP453-201ENST00000362503 119 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 Y_RNA.144-201ENST00000363521 113 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 Y_RNA.579-201ENST00000390939 94 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 RNU6-193P-201ENST00000410977 107 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 NDUFB4P5-201ENST00000415445 361 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 METTL15P3-201ENST00000415522 1221 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 CYCSP12-201ENST00000437729 300 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC114495.1-201ENST00000441274 436 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC073415.1-201ENST00000449240 153 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 MTND3P16-201ENST00000452205 344 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 Y_RNA.631-201ENST00000459607 101 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 COPS8P2-201ENST00000473228 627 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 HSPD1P15-201ENST00000505573 1122 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC114797.1-201ENST00000514003 728 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 ELOCP31-201ENST00000540463 467 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC105224.1-201ENST00000587055 421 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 SNRPGP17-201ENST00000603780 214 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms