Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC012065.2-201ENST00000421295 375 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 EIF2S2P3-201ENST00000428356 999 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AL590103.1-201ENST00000434488 307 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 TPTE2P1-204ENST00000435256 593 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 CST9LP2-201ENST00000437612 320 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC092685.1-201ENST00000447960 1243 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 RPS4XP13-201ENST00000483219 789 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AP001207.2-201ENST00000519490 539 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 OR5AK3P-201ENST00000527486 1297 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 SERPINE4P-201ENST00000554978 281 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC015917.1-201ENST00000579654 510 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 MIR3690-201ENST00000580266 75 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC007256.1-201ENST00000392253 2765 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC011978.2-201ENST00000569835 2054 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 SNORA51.2-201ENST00000364595 132 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL138880.1-201ENST00000405824 642 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 RNA5SP44-201ENST00000410446 133 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 TOMM22P1-201ENST00000418578 312 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC244453.4-201ENST00000419150 388 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 YWHAZP8-201ENST00000436935 731 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 RPL23AP15-201ENST00000450202 459 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 Z99714.1-201ENST00000450463 807 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 VN1R17P-201ENST00000472048 1090 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 HMGB1P38-201ENST00000490557 577 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 CEACAMP10-202ENST00000495431 496 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 FCF1P8-201ENST00000510322 597 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC104619.4-201ENST00000510773 249 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 RNA5SP217-201ENST00000515959 91 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 MTCO1P49-201ENST00000523429 802 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC015802.5-201ENST00000607478 399 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL121772.2-201ENST00000614331 297 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 U73479.1-201ENST00000618062 168 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
VAPAQ9P0L0 MTND5P27-201ENST00000428871 1720 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AC107081.3-201ENST00000612715 2034 ntBASIC3.12□□□□□ -1.91
VAPAQ9P0L0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.11□□□□□ -1.91
VAPAQ9P0L0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.11□□□□□ -1.91
VAPAQ9P0L0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VAPAQ9P0L0 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
VAPAQ9P0L0 RN7SKP280-201ENST00000364196 304 ntBASIC3.11□□□□□ -1.91
VAPAQ9P0L0 RNU6-335P-201ENST00000364563 113 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms