Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 MTCO1P12-201ENST00000414273 1543 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL359922.3-201ENST00000624779 1670 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC011155.1-201ENST00000316512 456 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 RNU6-28P-201ENST00000362378 107 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 MIR130B-202ENST00000385018 82 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 CTSL3P-202ENST00000412179 788 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC113618.1-201ENST00000416747 285 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 BEND7P1-201ENST00000422058 457 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 LINC00328-2P-201ENST00000436585 219 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 RPL5P7-201ENST00000444235 813 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC007383.1-201ENST00000445875 636 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL450023.1-201ENST00000450868 751 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 RPS4XP10-201ENST00000465034 731 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 VN1R17P-201ENST00000472048 1090 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 RPL21P6-201ENST00000479171 504 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC012181.1-201ENST00000479895 423 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC093267.1-201ENST00000489176 961 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 RPL23AP72-201ENST00000492447 435 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 RN7SKP219-201ENST00000516825 296 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 IGKV3D-25-201ENST00000519599 235 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 RPL7P20-201ENST00000520308 745 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC100784.1-201ENST00000522790 310 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AP003396.4-201ENST00000527574 265 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC105224.1-201ENST00000587055 421 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 DPPA3P3-201ENST00000603842 430 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL121992.2-201ENST00000606262 256 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL132822.1-201ENST00000617063 513 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
SSU72Q9NP77 AC004972.1-201ENST00000623934 2209 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 HSPA8P14-201ENST00000552265 1805 ntBASIC5.48□□□□□ -1.53
SSU72Q9NP77 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSU72Q9NP77 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 GVINP1-202ENST00000531871 7271 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 Y_RNA.100-201ENST00000363141 102 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 U3.12-201ENST00000364498 214 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 RNU6-1297P-201ENST00000384415 104 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AL356057.3-201ENST00000402607 340 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 PMCHL1-202ENST00000423102 261 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 RPL7L1P10-201ENST00000427790 463 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AL590233.1-201ENST00000430017 456 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC108059.2-201ENST00000434626 151 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 RPL5P22-201ENST00000480199 884 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC022360.1-201ENST00000521058 340 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 COPS8P3-201ENST00000526024 482 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms