Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 GAPDHP36-201ENST00000480688 918 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RN7SL604P-201ENST00000492589 296 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RPS6P4-201ENST00000494693 758 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 WBP1LP4-201ENST00000505043 344 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC008885.2-201ENST00000509506 930 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 MTCO3P28-201ENST00000513351 515 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RNU6-1225P-201ENST00000516336 65 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RNA5SP135-201ENST00000517019 125 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 HIGD1AP6-201ENST00000521833 279 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC090281.1-201ENST00000523019 276 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AP001207.1-201ENST00000524051 481 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC005832.3-201ENST00000537929 631 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RN7SL600P-201ENST00000581811 299 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC022069.1-201ENST00000582910 658 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC078899.5-201ENST00000612475 178 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC023158.2-201ENST00000614876 543 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL136964.1-201ENST00000622038 2990 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC124312.6-202ENST00000623624 418 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 IPO8P1-201ENST00000455509 3109 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 SGO1P2-201ENST00000429458 1589 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 SNORA60-201ENST00000362396 134 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RNU6-1066P-201ENST00000363573 105 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC068538.1-201ENST00000376856 336 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RPL31P52-201ENST00000407532 367 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RNU2-65P-201ENST00000410162 185 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RN7SKP177-201ENST00000410567 355 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RN7SKP33-201ENST00000410942 340 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 PRELID3BP11-201ENST00000414230 479 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC108032.1-201ENST00000416706 207 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 UBE2D3P1-201ENST00000436669 444 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AF228730.2-201ENST00000438784 848 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 MTCYBP34-201ENST00000439552 670 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RPL12P26-201ENST00000452430 487 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AL109741.2-201ENST00000455561 343 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 PNPLA4P1-201ENST00000458328 305 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 MTND1P16-201ENST00000465177 898 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC010683.1-201ENST00000473673 378 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 RPL7P18-201ENST00000478965 734 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC104090.1-201ENST00000506341 1171 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC109445.1-201ENST00000512356 383 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC068790.5-201ENST00000602741 355 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC026368.1-201ENST00000614934 690 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms