Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 AL450489.1-201ENST00000612071 468 ntBASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 AC135507.2-201ENST00000612443 309 ntBASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 AC139769.3-201ENST00000618383 175 ntBASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 AC092326.2-201ENST00000624772 1561 ntBASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LRTM1Q9HBL6 RNA5SP189-201ENST00000364920 115 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 SNORA70E-201ENST00000384492 135 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 MIR591-201ENST00000385290 95 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AIMP1P1-201ENST00000418670 937 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 MTCYBP7-201ENST00000419540 1134 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 OR1AA1P-201ENST00000419597 916 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 RPL7P44-201ENST00000424827 742 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 UBE2DNL-203ENST00000474922 222 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 RPL7P23-201ENST00000493874 747 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 OR5D17P-201ENST00000531492 978 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC025260.1-201ENST00000548858 430 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC021755.1-201ENST00000559747 1447 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC005183.1-201ENST00000603687 1979 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 RNA5SP108-201ENST00000605921 117 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 uc_338.25-201ENST00000613756 156 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 uc_338.9-201ENST00000617424 182 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 ZNF826P-207ENST00000622273 1910 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AC096656.1-201ENST00000623826 1364 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 AF117829.1-206ENST00000621883 3802 ntBASIC3.06□□□□□ -1.92
LRTM1Q9HBL6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 SNORA31-201ENST00000362607 130 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 OR6K3-202ENST00000368146 996 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 MIR490-201ENST00000384865 128 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 HMGB1P10-201ENST00000395823 563 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 TAF9BP1-201ENST00000396646 746 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 MTCO1P45-201ENST00000431457 267 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 HMGN2P21-201ENST00000447764 270 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC008481.1-201ENST00000463278 396 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 LARP7P4-201ENST00000481075 878 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC105429.2-201ENST00000610567 517 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC099778.2-201ENST00000610904 211 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC009464.1-201ENST00000615731 469 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 AC007256.1-201ENST00000392253 2765 ntBASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LRTM1Q9HBL6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
LRTM1Q9HBL6 VN1R51P-201ENST00000411675 945 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms