Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RPS12P5-201ENST00000423449 371 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC006946.1-201ENST00000429106 328 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 EXTL2P1-201ENST00000446218 416 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 SLC31A1P1-201ENST00000451221 567 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC104073.1-201ENST00000451988 151 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 NECAP1P2-201ENST00000455668 727 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 MTND1P16-201ENST00000465177 898 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 RN7SL132P-201ENST00000478131 296 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 RPL35P6-201ENST00000490024 372 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC091951.3-201ENST00000504093 246 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC139783.2-201ENST00000504847 1145 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 VWA8P1-201ENST00000510889 176 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 SLC2A13P1-201ENST00000531560 322 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 TRAV8-5-201ENST00000537369 341 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 LRRC34P1-201ENST00000542742 915 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 MIR4286-201ENST00000580651 93 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 LLPHP1-201ENST00000603571 367 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AL513477.2-201ENST00000607858 568 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 OR6R2P-201ENST00000609216 300 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC078899.5-201ENST00000612475 178 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC009464.1-201ENST00000615731 469 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC009159.2-201ENST00000617603 606 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 AL390862.1-201ENST00000635467 1469 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.23□□□□□ -1.73
POLR1BQ9H9Y6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AL158163.1-201ENST00000603915 1649 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 LINC00561-201ENST00000565815 2738 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 SNORD113-6-201ENST00000363345 75 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 RNA5SP283-201ENST00000365604 119 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 RNU6-356P-201ENST00000384140 107 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 SNORA51.6-201ENST00000384151 125 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 MIR3065-201ENST00000390137 79 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC068533.2-201ENST00000411872 306 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 OR8G2P-201ENST00000412796 908 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 UBTFL3-201ENST00000418934 1024 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 TIMM9P2-201ENST00000419324 266 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC006960.1-201ENST00000419980 153 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC010099.3-201ENST00000423896 409 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 OR51AB1P-201ENST00000429046 620 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 PPIAP3-201ENST00000450588 505 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC012671.1-201ENST00000451912 203 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 S100A11P1-201ENST00000477525 312 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 UBTFL6-201ENST00000477929 1024 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 RPL7P18-201ENST00000478965 734 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 SETP14-201ENST00000497538 873 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 HMGB1P28-201ENST00000507778 552 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC026407.1-201ENST00000518369 204 ntBASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR1BQ9H9Y6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms