Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC007496.3-201ENST00000624987 3443 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC079741.1-201ENST00000321498 212 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 SNORD116-12-201ENST00000384468 92 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 BTBD10P2-201ENST00000404779 676 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 RN7SKP33-201ENST00000410942 340 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC073264.1-201ENST00000411508 416 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL645638.1-201ENST00000440519 361 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 HMGN1P18-201ENST00000457642 277 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 RPL35AP28-201ENST00000459730 331 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 GAPDHP39-201ENST00000481866 979 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC012170.1-201ENST00000495139 359 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC084024.2-201ENST00000503480 791 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 SNORA64.4-201ENST00000516632 81 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 RNA5SP309-201ENST00000516670 106 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC022069.1-201ENST00000582910 658 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL049634.3-201ENST00000604968 457 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC103710.3-201ENST00000608157 948 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL592148.2-201ENST00000612210 372 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 CYCSP41-201ENST00000616920 296 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AL158163.2-201ENST00000619110 700 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC123767.1-202ENST00000620407 817 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC087821.2-201ENST00000637086 450 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 AC106754.1-201ENST00000562632 1513 ntBASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.74□□□□□ -1.81
VIPAS39Q9H9C1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 MTND5P27-201ENST00000428871 1720 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 ZNF29P-201ENST00000225587 168 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 RNA5SP366-201ENST00000365454 123 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 Y_RNA.472-201ENST00000384322 102 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 SNORD116-23-201ENST00000384645 92 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 MIR124-3-201ENST00000384866 87 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL079342.2-201ENST00000403367 482 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL136133.1-201ENST00000413694 376 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC016769.2-201ENST00000414815 475 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC108032.1-201ENST00000416706 207 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC119751.6-201ENST00000416712 186 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC008280.1-201ENST00000418851 412 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC092832.1-201ENST00000422934 400 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 SDCBPP2-201ENST00000424643 885 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL357552.1-201ENST00000445254 415 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL009048.1-201ENST00000450437 298 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 BX276092.4-201ENST00000452056 248 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 TVP23BP2-201ENST00000455082 615 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC087879.1-201ENST00000474343 374 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AP000563.1-201ENST00000490865 758 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 SNX5P1-201ENST00000505757 1041 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC016065.2-201ENST00000514530 444 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 RN7SKP234-201ENST00000517173 224 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 OR10V3P-201ENST00000525712 725 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 DUXAP6-201ENST00000553858 601 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AP001180.3-201ENST00000582221 145 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC245884.10-201ENST00000597355 337 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AP003973.1-201ENST00000604639 691 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 Mico1.1-201ENST00000611698 204 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 AC098679.5-201ENST00000624394 571 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms