Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 SNURFL-201ENST00000309296 343 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 OR11H4-201ENST00000315409 1082 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RNU6-777P-201ENST00000364265 104 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RN7SKP266-201ENST00000410232 287 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AL358176.3-201ENST00000420757 454 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 SKP1P1-201ENST00000438081 489 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 ARPC3P5-201ENST00000448802 534 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 TPT1P12-201ENST00000448968 492 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AL590365.1-201ENST00000450788 243 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 FGF7P6-202ENST00000451282 293 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC005008.1-201ENST00000456151 612 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RN7SL738P-201ENST00000470264 297 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC022795.1-201ENST00000473808 480 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RPL5P22-201ENST00000480199 884 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RPL9P6-201ENST00000492764 598 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 TMEM251P1-201ENST00000503717 318 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC022483.1-201ENST00000514020 567 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC104986.1-201ENST00000517978 436 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 RAB9BP1-201ENST00000519581 626 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 LSM6P2-201ENST00000552208 177 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AL390334.1-201ENST00000556395 450 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC006960.3-201ENST00000561845 705 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC123786.2-201ENST00000603459 275 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC010857.1-201ENST00000606398 594 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC103710.1-201ENST00000610003 901 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC140113.4-201ENST00000622087 222 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC012618.3-205ENST00000637896 1496 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC010329.2-201ENST00000595195 2737 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 THAP12P4-201ENST00000528321 2266 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 AC006378.2-201ENST00000623178 2476 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
AMBRA1Q9C0C7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.53□□□□□ -1.69
AMBRA1Q9C0C7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-289P-201ENST00000364093 107 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-533P-201ENST00000384144 107 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 MIR181A1-201ENST00000385026 110 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-952P-201ENST00000391164 108 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 COX6CP17-201ENST00000421389 185 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC007742.1-201ENST00000425789 329 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 USP9YP18-201ENST00000425912 695 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RPL36P19-201ENST00000430744 301 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AL049745.1-201ENST00000433953 286 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 ELOCP26-201ENST00000436067 329 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC004938.1-201ENST00000438468 308 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 MTND5P14-201ENST00000441481 1267 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RPL34P20-201ENST00000442771 351 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 OR7E125P-201ENST00000443450 846 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC009963.2-201ENST00000453431 138 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RPL10P17-201ENST00000453852 316 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 OR6K1P-201ENST00000456766 971 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 MTCO3P38-201ENST00000468910 766 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms