Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPL21P66-201ENST00000426566 466 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 OR2AS1P-201ENST00000427827 319 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPS29P7-201ENST00000439662 171 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL21P39-201ENST00000463605 483 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC011979.1-201ENST00000472300 483 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AL136126.1-201ENST00000473603 402 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL21P93-201ENST00000480465 489 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC233702.1-201ENST00000482905 502 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC087190.1-201ENST00000484462 480 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC093591.1-201ENST00000491435 481 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL21P129-201ENST00000491732 478 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL21P16-201ENST00000495531 483 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RNU1-143P-201ENST00000516296 146 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RNU6-1073P-201ENST00000517182 106 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 MTND2P26-201ENST00000528255 1029 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 OR8R1P-201ENST00000543943 764 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 HSPE1P5-201ENST00000561489 272 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 BNIP3P5-201ENST00000562290 498 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC067852.3-201ENST00000589177 561 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 PCNAP1-202ENST00000595299 752 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 U1.23-201ENST00000610293 146 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AL354976.1-201ENST00000613843 387 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AL157817.1-201ENST00000614264 790 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RNU1-68P-201ENST00000615382 146 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC091046.2-201ENST00000620775 665 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 U1.39-201ENST00000621562 146 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 MIR4496-201ENST00000635896 61 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AP001350.1-201ENST00000601906 1524 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 RNU2-6P-201ENST00000411404 190 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AL035423.1-201ENST00000420331 213 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 SAR1AP4-201ENST00000429225 591 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 CYCSP4-201ENST00000429682 331 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 HMGB3P6-201ENST00000444896 598 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 RPS15AP29-201ENST00000445539 400 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 OR6C72P-201ENST00000451403 892 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 HIGD1AP3-201ENST00000515857 278 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 RNU1-61P-201ENST00000516107 151 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AP001207.2-201ENST00000519490 539 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC103843.2-201ENST00000530523 682 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC107982.3-201ENST00000584957 985 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AL451086.1-201ENST00000605596 223 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC015802.5-201ENST00000607478 399 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC022509.4-201ENST00000621404 572 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 DDX6P1-205ENST00000441966 1436 ntBASIC2.39□□□□□ -2.03
AP1S3Q96PC3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
AP1S3Q96PC3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 DEFB109C-201ENST00000382575 264 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 DEFB109B-201ENST00000382656 264 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 RNU6-244P-201ENST00000391028 104 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 AL357075.1-201ENST00000404107 726 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 RPL19P1-201ENST00000411635 428 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 AC233728.2-201ENST00000425348 757 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 AL035458.1-201ENST00000433096 585 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 BX276092.4-201ENST00000452056 248 ntBASIC2.38□□□□□ -2.03
AP1S3Q96PC3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.38□□□□□ -2.03
AP1S3Q96PC3 GSTA11P-201ENST00000452866 669 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms