Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.22□□□□□ -1.73
USP47Q96K76 AL354710.1-201ENST00000453641 246 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 S100A11P1-201ENST00000477525 312 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 KC877373.1-201ENST00000479066 408 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AC004924.1-201ENST00000480160 781 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 OR2A20P-203ENST00000498397 1268 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.22□□□□□ -1.73
USP47Q96K76 AC108471.1-201ENST00000513977 287 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.22□□□□□ -1.73
USP47Q96K76 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.22□□□□□ -1.73
USP47Q96K76 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP47Q96K76 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP47Q96K76 AL451142.2-201ENST00000429076 2090 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USP47Q96K76 SNORA71.1-201ENST00000364523 117 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 RNA5SP126-201ENST00000365092 109 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.21□□□□□ -1.74
USP47Q96K76 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.21□□□□□ -1.74
USP47Q96K76 SETP5-201ENST00000437270 562 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 ELOCP10-201ENST00000440624 327 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.21□□□□□ -1.74
USP47Q96K76 AC005002.1-201ENST00000447458 540 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.21□□□□□ -1.74
USP47Q96K76 AC093278.1-201ENST00000494700 600 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 ATG10-AS1-201ENST00000504846 648 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 AC067904.2-201ENST00000517322 1283 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 MTCYBP19-201ENST00000517463 1124 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.21□□□□□ -1.74
USP47Q96K76 EIF1AXP2-201ENST00000555940 413 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP47Q96K76 MTCO2P22-201ENST00000603246 681 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 ELOCP34-201ENST00000604436 327 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 HMGB1P51-201ENST00000605166 638 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 OR2AS2P-201ENST00000606902 342 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.21□□□□□ -1.74
USP47Q96K76 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.21□□□□□ -1.74
USP47Q96K76 AC078899.5-201ENST00000612475 178 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 AP003122.5-201ENST00000527668 3766 ntBASIC4.21□□□□□ -1.74
USP47Q96K76 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP47Q96K76 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP47Q96K76 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP47Q96K76 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP47Q96K76 RNU4-23P-201ENST00000362839 140 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 RNA5SP80-201ENST00000410475 111 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.2□□□□□ -1.74
USP47Q96K76 UQCRHP3-201ENST00000451503 251 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.2□□□□□ -1.74
USP47Q96K76 RPL5P13-201ENST00000462840 709 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 AC114967.1-201ENST00000504890 259 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 AC010374.2-201ENST00000512933 535 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 AC026801.2-201ENST00000515352 425 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 RNU6-347P-201ENST00000516658 105 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.2□□□□□ -1.74
USP47Q96K76 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP47Q96K76 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.2□□□□□ -1.74
USP47Q96K76 AC093908.1-201ENST00000623125 8092 ntBASIC4.2□□□□□ -1.74
USP47Q96K76 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
USP47Q96K76 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.19□□□□□ -1.74
USP47Q96K76 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.19□□□□□ -1.74
USP47Q96K76 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
USP47Q96K76 RNU6-225P-201ENST00000384613 103 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.19□□□□□ -1.74
USP47Q96K76 RN7SKP222-201ENST00000410651 315 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 Z85994.2-201ENST00000434327 452 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.19□□□□□ -1.74
USP47Q96K76 RPL12P46-201ENST00000436610 195 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 EIF2S2P4-201ENST00000461070 984 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AC008481.1-201ENST00000463278 396 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 RPL23AP14-201ENST00000468281 468 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 PRELID3BP6-201ENST00000503839 571 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AC091917.2-201ENST00000505002 744 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AC068657.1-201ENST00000520807 306 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AC087276.1-201ENST00000529659 480 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.19□□□□□ -1.74
USP47Q96K76 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.19□□□□□ -1.74
USP47Q96K76 AC015871.2-201ENST00000603605 948 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AL391597.1-201ENST00000618707 694 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 AC233263.6-201ENST00000631132 1963 ntBASIC4.19□□□□□ -1.74
USP47Q96K76 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP47Q96K76 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.19□□□□□ -1.74
USP47Q96K76 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP47Q96K76 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP47Q96K76 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
USP47Q96K76 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP47Q96K76 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP47Q96K76 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP47Q96K76 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
USP47Q96K76 AC092079.1-201ENST00000558620 1985 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP47Q96K76 AC011155.1-201ENST00000316512 456 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 RNU6-564P-201ENST00000410983 104 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.18□□□□□ -1.74
USP47Q96K76 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.18□□□□□ -1.74
USP47Q96K76 DUTP6-201ENST00000425573 462 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 VN1R48P-201ENST00000448149 1036 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 MRPL35P4-201ENST00000453682 566 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 RN7SL75P-201ENST00000461926 281 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.18□□□□□ -1.74
USP47Q96K76 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
USP47Q96K76 AC245166.1-201ENST00000521012 253 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms