Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL672167.1-206ENST00000356293 943 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RNA5SP505-201ENST00000364748 108 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC009237.10-201ENST00000414112 510 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RPL7AP25-201ENST00000423357 805 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 OR4F13P-201ENST00000428478 931 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL589823.1-201ENST00000429577 183 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 MTCO3P5-201ENST00000433620 714 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AP000936.2-201ENST00000447151 681 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RPL39P6-201ENST00000448289 150 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RPL21P126-201ENST00000470049 478 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC087385.1-201ENST00000475062 312 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 ALDH7A1P3-201ENST00000492517 345 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 PRELID3BP7-201ENST00000503606 469 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 Y_RNA.695-201ENST00000516715 107 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SKP234-201ENST00000517173 224 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SKP92-201ENST00000517266 244 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC137768.1-201ENST00000549998 553 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 LSM6P2-201ENST00000552208 177 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 PSMB7P1-201ENST00000556349 514 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 U73023.1-201ENST00000603134 700 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC008782.1-201ENST00000603386 430 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL391497.1-201ENST00000608671 547 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC106028.5-201ENST00000610332 395 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC122108.2-201ENST00000611946 526 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AC007546.2-201ENST00000623996 360 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 FAM157B-203ENST00000639350 358 ntBASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 RNU6-623P-201ENST00000363143 105 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 MIR192-201ENST00000384915 110 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 CYB5AP4-201ENST00000396692 399 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AL023807.1-201ENST00000407932 359 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 RPS3AP9-201ENST00000417027 792 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF885P-201ENST00000420174 1098 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 RPL23AP16-201ENST00000441715 421 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC090013.1-201ENST00000485147 480 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC007686.1-201ENST00000488511 463 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC005726.1-201ENST00000494679 427 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC111000.3-201ENST00000508057 576 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC091965.2-201ENST00000512324 613 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC090151.1-201ENST00000520784 730 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC084783.1-201ENST00000565846 910 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 MTCYBP28-201ENST00000566728 1132 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 BNIP3P11-201ENST00000603878 563 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC064872.1-201ENST00000604823 1072 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AL160290.3-201ENST00000604869 165 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC092354.1-201ENST00000606057 376 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 RNU6-88P-201ENST00000606801 100 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AL031775.1-201ENST00000607014 887 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 Z98200.1-201ENST00000607298 470 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 OR6R2P-201ENST00000609216 300 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 MIR7844-201ENST00000616161 122 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AL356596.1-201ENST00000624230 379 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms