Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AL359265.2-201ENST00000434367 631 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 RPS17P8-201ENST00000434525 335 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 UBE2FP3-201ENST00000436366 524 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC005154.2-201ENST00000438110 379 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 NFU1P2-201ENST00000448700 469 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 RPS4XP5-202ENST00000449995 1334 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 BX248409.1-201ENST00000455497 255 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
DDX11Q96FC9 SNORD42A-201ENST00000459584 64 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AL672167.3-201ENST00000465951 960 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC112206.1-201ENST00000468416 477 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 TRBV8-2-201ENST00000475637 270 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC092989.1-201ENST00000481235 277 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC111193.1-201ENST00000504097 155 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 MTCYBP43-201ENST00000513621 740 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
DDX11Q96FC9 SNORA20.3-201ENST00000516880 132 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 IGKV2D-10-201ENST00000520194 281 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AP002748.2-201ENST00000528671 348 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AP002453.2-201ENST00000533503 320 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
DDX11Q96FC9 FKBP1BP1-201ENST00000553366 325 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC126323.6-202ENST00000568092 3511 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC009101.1-201ENST00000568135 242 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 KPNA2P3-201ENST00000584190 848 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC025449.1-201ENST00000603896 529 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC019193.2-201ENST00000610012 634 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC007497.1-201ENST00000610421 561 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC091834.1-201ENST00000614543 472 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 AC104260.1-201ENST00000616660 539 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 MIR6853-201ENST00000619642 74 ntBASIC5.61□□□□□ -1.51
DDX11Q96FC9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
DDX11Q96FC9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
DDX11Q96FC9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DDX11Q96FC9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DDX11Q96FC9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DDX11Q96FC9 RNA5SP88-201ENST00000365560 109 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 Y_RNA.450-201ENST00000384198 113 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RNU6-1300P-201ENST00000391046 108 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RNA5SP332-201ENST00000391063 115 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RPS3AP23-201ENST00000401762 784 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 MIR1284-201ENST00000408337 120 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 U3.35-201ENST00000408405 208 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RNU6-248P-201ENST00000410720 107 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RPL17P12-201ENST00000413391 526 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC114755.2-201ENST00000413520 361 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 OR51A3P-201ENST00000413596 924 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RPL6P29-201ENST00000414863 865 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC091390.1-201ENST00000433904 331 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 Z99127.3-201ENST00000448158 395 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
DDX11Q96FC9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 UBDP1-202ENST00000457888 382 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RPL23AP12-201ENST00000467573 473 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC104687.1-201ENST00000485829 412 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 RPL7P24-201ENST00000493052 752 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC069439.1-201ENST00000494739 167 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC046134.1-201ENST00000514454 666 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 RN7SKP92-201ENST00000517266 244 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC087276.1-201ENST00000529659 480 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC006960.3-201ENST00000561845 705 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 BPTFP1-201ENST00000579209 492 ntBASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.6□□□□□ -1.51
DDX11Q96FC9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms