Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC009313.2-201ENST00000417893 1941 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 MRPL50P2-201ENST00000416821 482 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 MTCO1P51-201ENST00000427672 1060 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC005189.1-201ENST00000431286 310 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 RPS4XP22-201ENST00000480755 780 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC245166.1-201ENST00000521012 253 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 CBX3P5-201ENST00000552017 521 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 RPL21P40-201ENST00000428586 483 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC107016.2-201ENST00000547968 190 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AL359535.1-201ENST00000612100 1087 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 MIR137-201ENST00000385223 102 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AL513477.1-202ENST00000417061 214 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AL513328.1-201ENST00000446460 224 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 ACTG1P13-201ENST00000486987 1043 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 HMGB3P14-201ENST00000494195 599 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 COX6CP8-201ENST00000522620 226 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 MIR4738-201ENST00000579134 87 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC096947.1-201ENST00000603233 470 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC025811.1-201ENST00000604312 472 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 MIR7111-201ENST00000619751 72 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC099506.2-201ENST00000623074 221 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 MIR622-201ENST00000638396 96 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 AC093831.2-201ENST00000624393 3427 ntBASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
ALMS1Q8TCU4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 RPL7P8-201ENST00000411964 730 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 OR51A3P-201ENST00000413596 924 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 GLRXP1-201ENST00000423261 334 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 HMGB1P18-201ENST00000438801 619 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC092185.1-201ENST00000491371 97 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 SERPINE4P-201ENST00000554978 281 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 OR5BR1P-201ENST00000524992 1330 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC046144.1-201ENST00000478559 1853 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC233981.1-201ENST00000423224 461 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC010401.1-201ENST00000463867 348 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 RPL31P13-201ENST00000484151 370 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 RNU6-991P-201ENST00000516168 107 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 RNA5SP24-201ENST00000516478 95 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC069218.2-201ENST00000411665 344 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 SMC4P1-201ENST00000414479 527 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 ANP32BP2-201ENST00000454525 545 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 NIPA2P2-201ENST00000496376 1083 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC083906.5-201ENST00000503722 328 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 AL365400.2-201ENST00000605604 902 ntBASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
ALMS1Q8TCU4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
ALMS1Q8TCU4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms