Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 ZNF192P1-203ENST00000565888 810 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AL355816.1-201ENST00000607951 118 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AL353743.4-201ENST00000422653 1547 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC004022.2-201ENST00000413824 193 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 BX842559.1-201ENST00000419615 532 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 ATP5JP1-201ENST00000431631 322 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 RPS7P5-201ENST00000441482 581 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 RNU7-27P-201ENST00000459281 62 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 RPL30P11-201ENST00000495304 339 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 OR4T1P-201ENST00000554933 911 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC005412.1-201ENST00000580812 1049 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 MIR5195-201ENST00000583555 115 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 LLPHP1-201ENST00000603571 367 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC091953.5-201ENST00000622919 233 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC019080.5-201ENST00000624891 757 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AL392088.2-201ENST00000637607 285 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AC119674.1-212ENST00000641155 993 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 AL365440.1-201ENST00000436135 2167 ntBASIC3.51□□□□□ -1.85
CCDC112Q8NEF3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AL049781.1-201ENST00000623195 3585 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 SNORA9-201ENST00000384215 133 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 MIR153-1-201ENST00000384914 90 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AL158156.1-201ENST00000422509 473 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 DSTNP2-201ENST00000504533 515 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 SNORA74D-201ENST00000516404 141 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AC011611.1-201ENST00000552179 197 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AC012119.1-201ENST00000603184 222 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC112Q8NEF3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 RPL23AP57-201ENST00000332361 466 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 U3.19-201ENST00000390893 196 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 SNORD17-201ENST00000390930 237 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 RPL31P1-201ENST00000398116 372 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 HSPE1P26-201ENST00000405341 275 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 HMGB1P13-201ENST00000406019 642 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 RBMY2UP-201ENST00000453474 324 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 RPL21P103-201ENST00000479921 488 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 RN7SKP13-201ENST00000515933 244 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 IGKV2-26-201ENST00000518305 343 ntBASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC112Q8NEF3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms