Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 Y_RNA.619-201ENST00000410951 90 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC093578.1-201ENST00000415219 368 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AL953862.1-201ENST00000423016 168 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 CYCSP46-201ENST00000423569 204 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AL031736.2-201ENST00000426573 787 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 RPL19P16-201ENST00000433839 588 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC092427.1-201ENST00000439177 601 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 TRIM60P18-201ENST00000441518 828 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 CFTRP1-201ENST00000456646 183 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC010301.1-201ENST00000473936 355 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 CBX3P3-201ENST00000508108 532 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC022447.1-201ENST00000515358 464 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 DEFB131D-201ENST00000526803 184 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC027369.5-201ENST00000533838 755 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 RPL21P12-201ENST00000559810 515 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC090515.3-201ENST00000560431 315 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC078795.2-201ENST00000602835 1252 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC025594.3-201ENST00000613068 790 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AL359740.1-201ENST00000624340 592 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC012442.3-202ENST00000636742 206 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 MTND4P26-201ENST00000415971 1359 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC009229.4-201ENST00000623854 1947 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 SNRPEP3-201ENST00000338402 276 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 RNU6-501P-201ENST00000364072 100 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 RNU4-91P-201ENST00000364778 135 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC004022.2-201ENST00000413824 193 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AL512286.1-201ENST00000439244 400 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC092641.1-201ENST00000440229 772 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AL831737.1-201ENST00000441288 271 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 BMI1P1-201ENST00000445879 941 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC090804.1-201ENST00000448870 490 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 RPL5P32-201ENST00000454085 879 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 SNORA70.24-201ENST00000517233 118 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC087276.1-201ENST00000529659 480 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 OR4A12P-201ENST00000530847 918 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 RN7SL703P-201ENST00000578485 302 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 MIR3124-201ENST00000582636 67 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC090181.2-201ENST00000602975 672 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC079089.3-201ENST00000603094 673 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 AC243773.3-201ENST00000613270 256 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 LARP1BP1-201ENST00000506036 1359 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 EIF2AP4-201ENST00000424793 1781 ntBASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SMC1BQ8NDV3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 MTND5P29-201ENST00000458676 1807 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms