Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AL603825.1-201ENST00000438481 80 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 DNAJC19P1-201ENST00000455312 319 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 TOPORSLP1-201ENST00000467693 2102 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 MTND4P10-201ENST00000446199 1363 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 RPL23AP4-201ENST00000427757 463 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 SNORA31.21-201ENST00000517180 77 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 NARSP2-201ENST00000518524 679 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC007424.1-203ENST00000554613 687 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 MIR4435-1-201ENST00000582552 80 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC092628.2-201ENST00000622492 339 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC079228.1-201ENST00000624774 1049 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 IGHVIII-44-202ENST00000636235 289 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 DNAJC19P3-201ENST00000594491 331 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 RPS3AP26-201ENST00000398259 784 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC008280.2-201ENST00000455473 307 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC010468.1-201ENST00000461022 817 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AC095050.2-201ENST00000510748 1458 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 AL592494.2-201ENST00000425455 1548 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 TAB3P1-202ENST00000452645 1634 ntBASIC1.88□□□□□ -2.11
VPS13DQ5THJ4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RPS12P23-201ENST00000419579 400 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 OR2AS1P-201ENST00000427827 319 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC091903.1-201ENST00000624322 454 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 PROS2P-201ENST00000474651 1951 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RNU6-55P-201ENST00000411092 107 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RNU6-954P-201ENST00000411355 107 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC105402.1-201ENST00000413336 545 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC087499.2-201ENST00000432861 149 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 UBE2D3P1-201ENST00000436669 444 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC114967.1-201ENST00000504890 259 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC112184.1-201ENST00000505179 312 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RNA5SP217-201ENST00000515959 91 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RNA5SP282-201ENST00000516355 108 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 EEF1A1P37-201ENST00000522748 715 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RNU6-859P-201ENST00000362728 107 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 MIR764-201ENST00000390811 85 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RHEBP3-201ENST00000411920 351 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RPS27AP9-201ENST00000477681 438 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC005351.1-201ENST00000511152 786 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AL442163.2-201ENST00000553912 710 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 OR52B1P-201ENST00000316506 909 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RPS4XP6-201ENST00000477670 797 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 RN7SKP283-201ENST00000517197 270 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 MIR1273D-201ENST00000577266 86 ntBASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13DQ5THJ4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms