Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC011155.1-201ENST00000316512 456 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AL672167.1-206ENST00000356293 943 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.553-201ENST00000384670 102 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC007066.1-201ENST00000392902 381 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 ZNF603P-201ENST00000405613 487 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC073335.1-201ENST00000427776 363 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC023347.2-201ENST00000433994 462 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 MTCO1P19-201ENST00000443487 500 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 snoU13.7-201ENST00000459220 104 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC010460.1-201ENST00000507087 466 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 MTATP6P22-201ENST00000507369 598 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 NRON-201ENST00000517270 370 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC106038.2-201ENST00000520706 568 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 DEFB131D-201ENST00000526803 184 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 HIGD1AP10-201ENST00000527837 282 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 LARP7P2-201ENST00000575306 125 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC008759.1-201ENST00000589783 983 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 VN1R92P-201ENST00000598511 928 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 BNIP3P33-201ENST00000598912 569 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 MTCYBP22-201ENST00000603788 447 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 RBM11P1-201ENST00000604951 799 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC243773.3-201ENST00000613270 256 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC073534.2-201ENST00000620377 381 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC005832.2-201ENST00000538921 1430 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
SLC44A4Q53GD3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 ZNF137P-201ENST00000456718 1920 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.3-201ENST00000362331 103 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RNU6-433P-201ENST00000363216 104 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 SNORA37-201ENST00000384504 129 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RNU6-146P-201ENST00000384602 108 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 MIR649-201ENST00000384843 97 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 ELOCP17-201ENST00000414751 326 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC013429.2-201ENST00000418798 781 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 MTND4LP11-201ENST00000422184 280 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 BMS1P19-201ENST00000433925 393 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AL353597.2-202ENST00000434901 373 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 LARP1BP3-201ENST00000437229 869 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RPL30P9-201ENST00000465586 330 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC010301.1-201ENST00000473936 355 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC087879.1-201ENST00000474343 374 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC110792.2-201ENST00000510278 224 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC091965.2-201ENST00000512324 613 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC015795.1-201ENST00000513669 327 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 MTCO1P35-201ENST00000515270 228 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC005868.1-201ENST00000536421 331 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms