Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK3Q00526 AC093227.2-201ENST00000589357 285 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK3Q00526 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK3Q00526 AC007566.2-201ENST00000603642 413 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 AC010680.4-201ENST00000605334 543 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 AP003392.5-201ENST00000607857 415 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 AC097478.2-201ENST00000610572 514 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 AP000676.4-201ENST00000624659 623 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDK3Q00526 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDK3Q00526 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK3Q00526 MARK2P15-201ENST00000432204 2186 ntBASIC3.97□□□□□ -1.77
CDK3Q00526 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK3Q00526 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
CDK3Q00526 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDK3Q00526 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK3Q00526 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK3Q00526 AC074029.4-201ENST00000624796 1859 ntBASIC3.96□□□□□ -1.77
CDK3Q00526 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 OR52B1P-201ENST00000316506 909 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 MIR448-201ENST00000362131 111 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 MIR153-1-201ENST00000384914 90 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 TAF9BP1-201ENST00000396646 746 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 AL008987.1-201ENST00000415528 237 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 USP9YP11-201ENST00000427537 717 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK3Q00526 AL050321.1-201ENST00000432363 400 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.96□□□□□ -1.78
CDK3Q00526 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK3Q00526 TPTE2P3-201ENST00000441562 1189 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 RPL23AP16-201ENST00000441715 421 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK3Q00526 RN7SL271P-201ENST00000487601 295 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 RPS4XP15-201ENST00000489210 795 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 SETP14-201ENST00000497538 873 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC017037.1-201ENST00000508460 471 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 MTCYBP37-201ENST00000510642 1133 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 ZNF705CP-201ENST00000530515 889 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC023050.2-201ENST00000544968 387 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK3Q00526 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 AC010198.2-201ENST00000550612 259 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 NBEAP1-201ENST00000554452 979 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.96□□□□□ -1.78
CDK3Q00526 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK3Q00526 AC007599.1-201ENST00000568688 1174 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AL592436.1-201ENST00000605135 558 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AL109618.2-201ENST00000605527 211 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC131235.4-201ENST00000609288 620 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 AC092184.1-201ENST00000625042 715 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.96□□□□□ -1.78
CDK3Q00526 AC116618.1-201ENST00000634617 774 ntBASIC3.96□□□□□ -1.78
CDK3Q00526 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDK3Q00526 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK3Q00526 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK3Q00526 SEPT7P7-201ENST00000420492 1301 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 FAM91A3P-201ENST00000456826 2544 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CDK3Q00526 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 CDR1-202ENST00000625883 1485 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 MTND4P26-201ENST00000415971 1359 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 RNU1-108P-201ENST00000362556 161 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 SNORA70E-201ENST00000384492 135 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 RNU6-83P-201ENST00000384568 112 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 AL445189.1-201ENST00000405722 338 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 RPS12P23-201ENST00000419579 400 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 MTCO2P21-201ENST00000419780 677 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 RPL7P2-201ENST00000427639 268 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK3Q00526 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms