Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AL592045.1-201ENST00000429867 352 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AC006445.2-201ENST00000510061 472 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC123768.4-201ENST00000616244 701 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HSPG2P98160 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HSPG2P98160 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HSPG2P98160 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HSPG2P98160 NCAPGP1-201ENST00000505112 1814 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
HSPG2P98160 AL137014.1-201ENST00000420490 1226 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HSPG2P98160 ANP32BP2-201ENST00000454525 545 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 ACTG1P13-201ENST00000486987 1043 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC010680.4-201ENST00000605334 543 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC1.77□□□□□ -2.13
HSPG2P98160 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HSPG2P98160 AL031595.2-201ENST00000624215 19071 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC004972.1-201ENST00000623934 2209 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HSPG2P98160 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HSPG2P98160 RNA5SP213-201ENST00000391031 106 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 OR9N1P-201ENST00000491296 333 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.77□□□□□ -2.13
HSPG2P98160 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 MIR26A1-201ENST00000362205 77 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 RNU4-53P-201ENST00000410828 140 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.76□□□□□ -2.13
HSPG2P98160 AC073587.1-201ENST00000447093 876 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.76□□□□□ -2.13
HSPG2P98160 AC243972.3-201ENST00000539655 198 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 NTAN1P1-201ENST00000603150 646 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.76□□□□□ -2.13
HSPG2P98160 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
HSPG2P98160 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 SETP15-201ENST00000412724 337 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.76□□□□□ -2.13
HSPG2P98160 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.76□□□□□ -2.13
HSPG2P98160 RPL23AP22-201ENST00000437556 453 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 HNRNPKP5-201ENST00000515300 253 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 UBTFL10-201ENST00000528532 562 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 OR4K7P-201ENST00000580232 945 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 AC017007.4-201ENST00000503353 1352 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.76□□□□□ -2.13
HSPG2P98160 RPL23AP15-201ENST00000450202 459 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 HMGB1P15-201ENST00000453854 435 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 MTCYBP14-201ENST00000457471 715 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
HSPG2P98160 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 SULT1C2P2-201ENST00000562517 294 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.76□□□□□ -2.13
HSPG2P98160 AC009039.2-201ENST00000624524 529 ntBASIC1.76□□□□□ -2.13
HSPG2P98160 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HSPG2P98160 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.75□□□□□ -2.13
HSPG2P98160 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HSPG2P98160 RNA5SP322-201ENST00000363617 119 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 AC117522.3-201ENST00000507974 584 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 SETP1-201ENST00000556014 845 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC015712.3-201ENST00000559380 164 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC009063.1-201ENST00000563342 702 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HSPG2P98160 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.75□□□□□ -2.13
HSPG2P98160 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HSPG2P98160 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HSPG2P98160 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HSPG2P98160 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HSPG2P98160 Z98941.1-201ENST00000407764 100 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 MTCO3P16-201ENST00000454456 754 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC022795.1-201ENST00000473808 480 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC078817.1-201ENST00000492623 435 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 MIR181A2-201ENST00000384863 110 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC110754.1-201ENST00000399740 601 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC091179.1-201ENST00000461606 579 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 RN7SL330P-201ENST00000469709 307 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AP000859.1-201ENST00000525536 307 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 AC015911.5-201ENST00000587076 451 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 AC009237.17-201ENST00000618111 748 ntBASIC1.75□□□□□ -2.13
HSPG2P98160 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
HSPG2P98160 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms