Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AP001180.3-201ENST00000582221 145 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AC091488.1-201ENST00000604239 660 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AC004241.3-201ENST00000611728 517 ntBASIC2.77□□□□□ -1.97
UBA52P62987 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
UBA52P62987 Z83843.1-201ENST00000604070 3685 ntBASIC2.77□□□□□ -1.97
UBA52P62987 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.77□□□□□ -1.97
UBA52P62987 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.77□□□□□ -1.97
UBA52P62987 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UBA52P62987 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.76□□□□□ -1.97
UBA52P62987 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.76□□□□□ -1.97
UBA52P62987 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
UBA52P62987 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.76□□□□□ -1.97
UBA52P62987 AC025125.1-201ENST00000624743 1922 ntBASIC2.76□□□□□ -1.97
UBA52P62987 AL355578.1-201ENST00000607405 1328 ntBASIC2.76□□□□□ -1.97
UBA52P62987 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.76□□□□□ -1.97
UBA52P62987 RNA5SP374-201ENST00000362939 125 ntBASIC2.76□□□□□ -1.97
UBA52P62987 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
UBA52P62987 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UBA52P62987 UBA52P6-201ENST00000399822 382 ntBASIC2.76□□□□□ -1.97
UBA52P62987 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.76□□□□□ -1.97
UBA52P62987 AL390023.1-201ENST00000428836 262 ntBASIC2.76□□□□□ -1.97
UBA52P62987 OR6C71P-201ENST00000432580 913 ntBASIC2.76□□□□□ -1.97
UBA52P62987 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.76□□□□□ -1.97
UBA52P62987 AL831737.1-201ENST00000441288 271 ntBASIC2.76□□□□□ -1.97
UBA52P62987 COX6CP2-201ENST00000444980 225 ntBASIC2.76□□□□□ -1.97
UBA52P62987 AL671855.1-201ENST00000446875 1203 ntBASIC2.76□□□□□ -1.97
UBA52P62987 SLC31A1P1-201ENST00000451221 567 ntBASIC2.76□□□□□ -1.97
UBA52P62987 RN7SL504P-201ENST00000494496 287 ntBASIC2.76□□□□□ -1.97
UBA52P62987 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.76□□□□□ -1.97
UBA52P62987 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.76□□□□□ -1.97
UBA52P62987 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.76□□□□□ -1.97
UBA52P62987 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.76□□□□□ -1.97
UBA52P62987 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.76□□□□□ -1.97
UBA52P62987 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.76□□□□□ -1.97
UBA52P62987 MIR4513-201ENST00000581077 86 ntBASIC2.76□□□□□ -1.97
UBA52P62987 MIR4276-201ENST00000584832 70 ntBASIC2.76□□□□□ -1.97
UBA52P62987 AC015802.5-201ENST00000607478 399 ntBASIC2.76□□□□□ -1.97
UBA52P62987 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.76□□□□□ -1.97
UBA52P62987 AC117529.2-201ENST00000512159 2068 ntBASIC2.76□□□□□ -1.97
UBA52P62987 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
UBA52P62987 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UBA52P62987 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UBA52P62987 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
UBA52P62987 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UBA52P62987 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.75□□□□□ -1.97
UBA52P62987 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UBA52P62987 AL353743.4-201ENST00000422653 1547 ntBASIC2.75□□□□□ -1.97
UBA52P62987 HSPA8P19-201ENST00000505359 1517 ntBASIC2.75□□□□□ -1.97
UBA52P62987 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UBA52P62987 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UBA52P62987 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UBA52P62987 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.75□□□□□ -1.97
UBA52P62987 Z99755.1-201ENST00000414048 380 ntBASIC2.75□□□□□ -1.97
UBA52P62987 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UBA52P62987 AC012065.2-201ENST00000421295 375 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AC073464.3-201ENST00000422564 712 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.75□□□□□ -1.97
UBA52P62987 NPM1P48-201ENST00000436002 853 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.75□□□□□ -1.97
UBA52P62987 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.75□□□□□ -1.97
UBA52P62987 RPL37P3-201ENST00000456825 293 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AP001992.1-205ENST00000462248 379 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AC110794.1-201ENST00000505816 425 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.75□□□□□ -1.97
UBA52P62987 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.75□□□□□ -1.97
UBA52P62987 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.75□□□□□ -1.97
UBA52P62987 AC068714.1-201ENST00000559623 800 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.75□□□□□ -1.97
UBA52P62987 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.75□□□□□ -1.97
UBA52P62987 AC125494.3-201ENST00000602759 455 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AC006557.5-201ENST00000603126 811 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AC012119.1-201ENST00000603184 222 ntBASIC2.75□□□□□ -1.97
UBA52P62987 AL137843.1-201ENST00000605078 385 ntBASIC2.75□□□□□ -1.97
UBA52P62987 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.75□□□□□ -1.97
UBA52P62987 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.75□□□□□ -1.97
UBA52P62987 AL162274.2-201ENST00000614406 332 ntBASIC2.75□□□□□ -1.97
UBA52P62987 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.75□□□□□ -1.97
UBA52P62987 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
UBA52P62987 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.75□□□□□ -1.97
UBA52P62987 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UBA52P62987 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBA52P62987 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.74□□□□□ -1.97
UBA52P62987 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.74□□□□□ -1.97
UBA52P62987 RPL23AP57-201ENST00000332361 466 ntBASIC2.74□□□□□ -1.97
UBA52P62987 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AL034403.1-201ENST00000399414 885 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AP000567.1-201ENST00000406413 156 ntBASIC2.74□□□□□ -1.97
UBA52P62987 MTND2P16-201ENST00000419987 799 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AC127537.2-201ENST00000439258 465 ntBASIC2.74□□□□□ -1.97
UBA52P62987 CCRL1P1-201ENST00000449542 1053 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.74□□□□□ -1.97
UBA52P62987 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
UBA52P62987 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.74□□□□□ -1.97
UBA52P62987 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
UBA52P62987 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.74□□□□□ -1.97
UBA52P62987 AP004242.1-201ENST00000533701 349 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.74□□□□□ -1.97
UBA52P62987 AC024224.1-201ENST00000538284 609 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms