Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.56□□□□□ -1.68
CLRN1P58418 Y_RNA.38-201ENST00000362617 102 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 SNORA17.1-201ENST00000362945 126 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RNU6-181P-201ENST00000363225 107 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.56□□□□□ -1.68
CLRN1P58418 MT-TL1-201ENST00000386347 75 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 MTND4LP20-201ENST00000402379 270 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AL356421.1-201ENST00000403255 413 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 MIR1182-201ENST00000408363 97 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RNU2-21P-201ENST00000410368 188 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RNU2-8P-201ENST00000410727 190 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.56□□□□□ -1.68
CLRN1P58418 HMGB3P20-201ENST00000417997 600 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RPL31P45-201ENST00000419532 356 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RPL7P57-201ENST00000423238 740 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 EI24P4-201ENST00000423683 1078 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.56□□□□□ -1.68
CLRN1P58418 AL590233.1-201ENST00000430017 456 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.56□□□□□ -1.68
CLRN1P58418 TCEA1P1-201ENST00000449716 880 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 HMGB1P15-201ENST00000453854 435 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.56□□□□□ -1.68
CLRN1P58418 AC011225.1-201ENST00000457751 369 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RPS21P4-201ENST00000487122 248 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 COX6B1P2-201ENST00000489624 230 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 TXNP6-201ENST00000510190 310 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.56□□□□□ -1.68
CLRN1P58418 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.56□□□□□ -1.68
CLRN1P58418 Vault.3-201ENST00000516676 95 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 RNU6-445P-201ENST00000516949 107 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.56□□□□□ -1.68
CLRN1P58418 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.56□□□□□ -1.68
CLRN1P58418 AL359219.2-201ENST00000555184 348 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC007225.2-201ENST00000562529 256 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC009101.1-201ENST00000568135 242 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC053481.3-201ENST00000577881 843 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.56□□□□□ -1.68
CLRN1P58418 AC008752.3-201ENST00000588113 712 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.56□□□□□ -1.68
CLRN1P58418 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 RPL12P25-202ENST00000598100 674 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC012507.3-201ENST00000603556 477 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 IMMP1LP3-201ENST00000604197 224 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AL512329.2-201ENST00000607350 548 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 MIR6768-201ENST00000610734 72 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AL020991.1-201ENST00000612314 373 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC009318.4-201ENST00000620496 486 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 AC139792.3-201ENST00000623525 224 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 AC009229.4-201ENST00000623854 1947 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 AL592148.3-201ENST00000608771 2646 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 AC097714.1-201ENST00000511272 1647 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 AC008033.1-201ENST00000216407 1162 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 SNORA2.3-201ENST00000383920 135 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 MIR323B-201ENST00000385269 82 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 RPL23AP32-201ENST00000395315 459 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 DUTP5-201ENST00000406790 469 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 MIR1286-201ENST00000408112 78 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AL359704.1-201ENST00000411586 781 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.55□□□□□ -1.68
CLRN1P58418 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC013429.2-201ENST00000418798 781 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.55□□□□□ -1.68
CLRN1P58418 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.55□□□□□ -1.68
CLRN1P58418 AL035410.1-201ENST00000427409 427 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.55□□□□□ -1.68
CLRN1P58418 CEACAMP1-201ENST00000434624 1035 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.55□□□□□ -1.68
CLRN1P58418 PPIAP20-201ENST00000449839 135 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC021660.1-201ENST00000465006 554 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms