Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPL23AP26-201ENST00000412728 464 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH11P55287 RPL30P3-201ENST00000424262 333 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC004975.1-201ENST00000428733 208 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 MTND5P25-201ENST00000430499 799 ntBASIC3.82□□□□□ -1.8
CDH11P55287 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH11P55287 YWHAZP7-201ENST00000436906 631 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH11P55287 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 AC104978.1-201ENST00000449387 391 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 RPL12P26-201ENST00000452430 487 ntBASIC3.82□□□□□ -1.8
CDH11P55287 NDUFA5P7-201ENST00000452914 242 ntBASIC3.82□□□□□ -1.8
CDH11P55287 DHFRP3-201ENST00000455595 559 ntBASIC3.82□□□□□ -1.8
CDH11P55287 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 ATG12P2-201ENST00000456830 416 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH11P55287 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH11P55287 UQCRHP4-201ENST00000471686 272 ntBASIC3.82□□□□□ -1.8
CDH11P55287 RPL7P18-201ENST00000478965 734 ntBASIC3.82□□□□□ -1.8
CDH11P55287 RPS3AP22-201ENST00000488297 769 ntBASIC3.82□□□□□ -1.8
CDH11P55287 RPL7P38-201ENST00000488396 739 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 MTATP6P22-201ENST00000507369 598 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 OR5H4P-201ENST00000510851 923 ntBASIC3.82□□□□□ -1.8
CDH11P55287 MRPS33P3-201ENST00000513456 322 ntBASIC3.82□□□□□ -1.8
CDH11P55287 ARL2BPP5-201ENST00000523141 481 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AP001189.2-201ENST00000527320 189 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AC007834.2-201ENST00000536310 343 ntBASIC3.82□□□□□ -1.8
CDH11P55287 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 OSBPL9P5-201ENST00000542581 171 ntBASIC3.82□□□□□ -1.8
CDH11P55287 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AC063950.1-201ENST00000552036 308 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AL389895.1-201ENST00000554127 252 ntBASIC3.82□□□□□ -1.8
CDH11P55287 HIGD1AP17-201ENST00000554576 276 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC084757.1-201ENST00000559987 490 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AL020997.2-201ENST00000602607 184 ntBASIC3.82□□□□□ -1.8
CDH11P55287 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH11P55287 AC009220.3-201ENST00000604318 586 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AL592221.1-201ENST00000605266 382 ntBASIC3.82□□□□□ -1.8
CDH11P55287 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 AP006248.2-201ENST00000623309 592 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC120349.2-201ENST00000625002 298 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH11P55287 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 AC140479.6-201ENST00000633535 357 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH11P55287 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 NOL8P1-201ENST00000508336 3529 ntBASIC3.82□□□□□ -1.8
CDH11P55287 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 AC018555.1-201ENST00000567548 1980 ntBASIC3.82□□□□□ -1.8
CDH11P55287 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH11P55287 MAPK10-253ENST00000641010 4072 ntBASIC3.81□□□□□ -1.8
CDH11P55287 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 AC114546.3-201ENST00000623582 1734 ntBASIC3.81□□□□□ -1.8
CDH11P55287 IQCB2P-201ENST00000401788 1633 ntBASIC3.81□□□□□ -1.8
CDH11P55287 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AP000526.1-201ENST00000603308 1388 ntBASIC3.81□□□□□ -1.8
CDH11P55287 RN7SKP44-201ENST00000363602 316 ntBASIC3.81□□□□□ -1.8
CDH11P55287 Y_RNA.311-201ENST00000365068 96 ntBASIC3.81□□□□□ -1.8
CDH11P55287 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CDH11P55287 RNU6-921P-201ENST00000384361 107 ntBASIC3.81□□□□□ -1.8
CDH11P55287 SNORD116-8-201ENST00000384365 95 ntBASIC3.81□□□□□ -1.8
CDH11P55287 SNORA70C-201ENST00000384538 135 ntBASIC3.81□□□□□ -1.8
CDH11P55287 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH11P55287 RPL36P19-201ENST00000430744 301 ntBASIC3.81□□□□□ -1.8
CDH11P55287 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 AC105402.2-201ENST00000438503 358 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH11P55287 NUTF2P3-201ENST00000448540 384 ntBASIC3.81□□□□□ -1.8
CDH11P55287 HMGB3P21-201ENST00000452483 547 ntBASIC3.81□□□□□ -1.8
CDH11P55287 HMGN3P1-201ENST00000453847 193 ntBASIC3.81□□□□□ -1.8
CDH11P55287 GAPDHP36-201ENST00000480688 918 ntBASIC3.81□□□□□ -1.8
CDH11P55287 KLRA1P-201ENST00000503499 986 ntBASIC3.81□□□□□ -1.8
CDH11P55287 BNIP3P41-201ENST00000503774 571 ntBASIC3.81□□□□□ -1.8
CDH11P55287 HSPE1P23-201ENST00000509838 286 ntBASIC3.81□□□□□ -1.8
CDH11P55287 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDH11P55287 MTCO1P35-201ENST00000515270 228 ntBASIC3.81□□□□□ -1.8
CDH11P55287 MRPL49P2-201ENST00000521066 465 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH11P55287 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH11P55287 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms