Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATP1B3P54709 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.24□□□□□ -1.89
ATP1B3P54709 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATP1B3P54709 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP1B3P54709 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.24□□□□□ -1.89
ATP1B3P54709 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 OR4A15-201ENST00000314706 1035 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATP1B3P54709 RNU6-115P-201ENST00000364310 107 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 RNU6-730P-201ENST00000383954 104 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 MIR141-201ENST00000384975 95 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AP000567.1-201ENST00000406413 156 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 CRYBB2P1-203ENST00000415709 538 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 HMGB3P5-201ENST00000428894 612 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AL662791.1-201ENST00000441992 928 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC009220.1-201ENST00000451614 275 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 CYCSP53-201ENST00000455540 265 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 TRBV26-201ENST00000456572 344 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP1B3P54709 NDUFA5P9-201ENST00000472609 340 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC011352.3-201ENST00000505162 593 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 HMGB3P15-201ENST00000507326 574 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AC026784.1-201ENST00000507986 352 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 RNA5SP135-201ENST00000517019 125 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
ATP1B3P54709 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC006960.3-201ENST00000561845 705 ntBASIC3.24□□□□□ -1.89
ATP1B3P54709 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.24□□□□□ -1.89
ATP1B3P54709 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.24□□□□□ -1.89
ATP1B3P54709 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP1B3P54709 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP1B3P54709 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
ATP1B3P54709 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP1B3P54709 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP1B3P54709 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP1B3P54709 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP1B3P54709 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP1B3P54709 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ATP1B3P54709 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP1B3P54709 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATP1B3P54709 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP1B3P54709 RNVU1-3-201ENST00000364313 161 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 RNU6-207P-201ENST00000384137 107 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 RNA5SP424-201ENST00000390988 115 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.23□□□□□ -1.89
ATP1B3P54709 GSTA8P-201ENST00000404253 637 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 SNORA3.3-201ENST00000408712 125 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 RN7SKP285-201ENST00000410137 318 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP1B3P54709 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP1B3P54709 TCEA1P2-201ENST00000420496 906 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 FNDC3CP-201ENST00000420795 1155 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 SFR1P2-201ENST00000421841 730 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 AC017083.1-201ENST00000428093 483 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP1B3P54709 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.23□□□□□ -1.89
ATP1B3P54709 AL365440.1-201ENST00000436135 2167 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 Z74696.2-201ENST00000436514 498 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 AC000041.1-201ENST00000439655 175 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 AL592437.1-201ENST00000443781 492 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 SETD6P1-201ENST00000444575 317 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 RPL7P52-201ENST00000449200 742 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.23□□□□□ -1.89
ATP1B3P54709 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP1B3P54709 snoU13.24-201ENST00000458998 104 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP1B3P54709 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.23□□□□□ -1.89
ATP1B3P54709 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP1B3P54709 USP9YP5-201ENST00000511770 630 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 SNORA26.10-201ENST00000516427 141 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 SNORA31.20-201ENST00000517111 133 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 RN7SKP289-201ENST00000517244 295 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATP1B3P54709 AC006518.2-201ENST00000542513 940 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP1B3P54709 SYF2P1-201ENST00000550658 413 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP1B3P54709 AGGF1P6-201ENST00000569213 976 ntBASIC3.23□□□□□ -1.89
ATP1B3P54709 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms