Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TMSB4XP1-201ENST00000424567 135 ntBASIC4.66□□□□□ -1.66
COPB1P53618 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 AL132765.1-201ENST00000434165 553 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 MTND4P6-201ENST00000438297 472 ntBASIC4.66□□□□□ -1.66
COPB1P53618 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.66□□□□□ -1.66
COPB1P53618 PTMAP3-201ENST00000447474 330 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.66□□□□□ -1.66
COPB1P53618 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.66□□□□□ -1.66
COPB1P53618 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 OR52A4P-201ENST00000472867 958 ntBASIC4.66□□□□□ -1.66
COPB1P53618 UBA52P3-201ENST00000491303 382 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC005912.1-201ENST00000495392 255 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC104685.1-201ENST00000502445 371 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC060788.1-201ENST00000521318 469 ntBASIC4.66□□□□□ -1.66
COPB1P53618 SMARCE1P4-201ENST00000523647 241 ntBASIC4.66□□□□□ -1.66
COPB1P53618 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.66□□□□□ -1.66
COPB1P53618 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.66□□□□□ -1.66
COPB1P53618 PARP1P2-201ENST00000556806 195 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 AC138915.2-201ENST00000569776 97 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC068790.4-201ENST00000602474 263 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC078795.2-201ENST00000602835 1252 ntBASIC4.66□□□□□ -1.66
COPB1P53618 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.66□□□□□ -1.66
COPB1P53618 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPB1P53618 AC006338.2-201ENST00000616864 791 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC009509.4-201ENST00000619202 509 ntBASIC4.66□□□□□ -1.66
COPB1P53618 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPB1P53618 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPB1P53618 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.66□□□□□ -1.66
COPB1P53618 AC127502.3-201ENST00000636170 1206 ntBASIC4.66□□□□□ -1.66
COPB1P53618 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.66□□□□□ -1.66
COPB1P53618 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPB1P53618 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPB1P53618 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPB1P53618 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.65□□□□□ -1.66
COPB1P53618 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
COPB1P53618 AC022031.1-201ENST00000585985 2593 ntBASIC4.65□□□□□ -1.66
COPB1P53618 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
COPB1P53618 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COPB1P53618 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COPB1P53618 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.65□□□□□ -1.66
COPB1P53618 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COPB1P53618 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.65□□□□□ -1.66
COPB1P53618 OR4K15-201ENST00000305051 1216 ntBASIC4.65□□□□□ -1.67
COPB1P53618 U3.4-201ENST00000363352 213 ntBASIC4.65□□□□□ -1.67
COPB1P53618 OR5H15-201ENST00000383696 930 ntBASIC4.65□□□□□ -1.67
COPB1P53618 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 CYCSP45-201ENST00000402289 315 ntBASIC4.65□□□□□ -1.67
COPB1P53618 LAP3P1-201ENST00000403648 294 ntBASIC4.65□□□□□ -1.67
COPB1P53618 RNA5SP39-201ENST00000411245 120 ntBASIC4.65□□□□□ -1.67
COPB1P53618 MTCO1P21-201ENST00000416634 589 ntBASIC4.65□□□□□ -1.67
COPB1P53618 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COPB1P53618 OR5BE1P-201ENST00000425977 939 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AL513175.1-201ENST00000431492 780 ntBASIC4.65□□□□□ -1.67
COPB1P53618 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.65□□□□□ -1.67
COPB1P53618 RPL23AP52-201ENST00000439311 478 ntBASIC4.65□□□□□ -1.67
COPB1P53618 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.65□□□□□ -1.67
COPB1P53618 ARL2BPP10-201ENST00000446487 531 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.65□□□□□ -1.67
COPB1P53618 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 KATNBL1P6-201ENST00000453433 915 ntBASIC4.65□□□□□ -1.67
COPB1P53618 MTCO3P11-201ENST00000455103 774 ntBASIC4.65□□□□□ -1.67
COPB1P53618 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.65□□□□□ -1.67
COPB1P53618 RPS23P7-201ENST00000466210 444 ntBASIC4.65□□□□□ -1.67
COPB1P53618 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC139783.2-201ENST00000504847 1145 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COPB1P53618 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.65□□□□□ -1.67
COPB1P53618 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 AC091965.2-201ENST00000512324 613 ntBASIC4.65□□□□□ -1.67
COPB1P53618 RN7SKP92-201ENST00000517266 244 ntBASIC4.65□□□□□ -1.67
COPB1P53618 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COPB1P53618 AP001189.2-201ENST00000527320 189 ntBASIC4.65□□□□□ -1.67
COPB1P53618 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.65□□□□□ -1.67
COPB1P53618 AP002963.1-201ENST00000530590 184 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC009643.1-201ENST00000532030 391 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.65□□□□□ -1.67
COPB1P53618 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.65□□□□□ -1.67
COPB1P53618 AC006362.1-201ENST00000567392 174 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC012414.6-201ENST00000568241 401 ntBASIC4.65□□□□□ -1.67
COPB1P53618 MIR5096-201ENST00000583713 70 ntBASIC4.65□□□□□ -1.67
COPB1P53618 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COPB1P53618 AC008507.1-201ENST00000587506 734 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.65□□□□□ -1.67
COPB1P53618 AC091946.2-201ENST00000606105 291 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC024560.3-201ENST00000608482 349 ntBASIC4.65□□□□□ -1.67
COPB1P53618 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COPB1P53618 uc_338.13-201ENST00000618243 179 ntBASIC4.65□□□□□ -1.67
COPB1P53618 AC243756.2-201ENST00000618406 463 ntBASIC4.65□□□□□ -1.67
COPB1P53618 OR5BE1P-202ENST00000641168 1176 ntBASIC4.65□□□□□ -1.67
COPB1P53618 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms