Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.28□□□□□ -1.72
MSH6P52701 uc_338.32-201ENST00000615087 172 ntBASIC4.28□□□□□ -1.72
MSH6P52701 AL049780.3-201ENST00000624612 1583 ntBASIC4.28□□□□□ -1.72
MSH6P52701 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MSH6P52701 MIR365B-201ENST00000362317 111 ntBASIC4.27□□□□□ -1.73
MSH6P52701 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
MSH6P52701 RN7SKP222-201ENST00000410651 315 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.27□□□□□ -1.73
MSH6P52701 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.27□□□□□ -1.73
MSH6P52701 HMGN1P8-201ENST00000463578 288 ntBASIC4.27□□□□□ -1.73
MSH6P52701 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.27□□□□□ -1.73
MSH6P52701 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.27□□□□□ -1.73
MSH6P52701 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.27□□□□□ -1.73
MSH6P52701 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.27□□□□□ -1.73
MSH6P52701 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.27□□□□□ -1.73
MSH6P52701 TRAV11-201ENST00000539512 339 ntBASIC4.27□□□□□ -1.73
MSH6P52701 MIR4524B-201ENST00000581569 115 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.27□□□□□ -1.73
MSH6P52701 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.27□□□□□ -1.73
MSH6P52701 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.27□□□□□ -1.73
MSH6P52701 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.27□□□□□ -1.73
MSH6P52701 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MSH6P52701 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MSH6P52701 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MSH6P52701 XGY1-201ENST00000381172 446 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AC019155.1-201ENST00000382242 574 ntBASIC4.27□□□□□ -1.73
MSH6P52701 SNORA18.3-201ENST00000384122 132 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AL356968.1-201ENST00000416622 474 ntBASIC4.27□□□□□ -1.73
MSH6P52701 MYL8P-204ENST00000431574 518 ntBASIC4.27□□□□□ -1.73
MSH6P52701 RPL21P112-201ENST00000434403 463 ntBASIC4.27□□□□□ -1.73
MSH6P52701 RPS20P32-201ENST00000456044 356 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AC117440.1-201ENST00000474107 571 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.27□□□□□ -1.73
MSH6P52701 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.27□□□□□ -1.73
MSH6P52701 RPL7P47-201ENST00000497299 556 ntBASIC4.27□□□□□ -1.73
MSH6P52701 MIR2276-201ENST00000516886 89 ntBASIC4.27□□□□□ -1.73
MSH6P52701 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.27□□□□□ -1.73
MSH6P52701 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.27□□□□□ -1.73
MSH6P52701 AL512310.1-201ENST00000548639 172 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.27□□□□□ -1.73
MSH6P52701 AC009097.3-201ENST00000563557 1018 ntBASIC4.27□□□□□ -1.73
MSH6P52701 AC026790.2-201ENST00000606282 430 ntBASIC4.27□□□□□ -1.73
MSH6P52701 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.27□□□□□ -1.73
MSH6P52701 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSH6P52701 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MSH6P52701 U3.12-201ENST00000364498 214 ntBASIC4.26□□□□□ -1.73
MSH6P52701 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.26□□□□□ -1.73
MSH6P52701 HMGB3P10-201ENST00000434734 572 ntBASIC4.26□□□□□ -1.73
MSH6P52701 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.26□□□□□ -1.73
MSH6P52701 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.26□□□□□ -1.73
MSH6P52701 AP000936.3-201ENST00000438127 255 ntBASIC4.26□□□□□ -1.73
MSH6P52701 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.26□□□□□ -1.73
MSH6P52701 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.26□□□□□ -1.73
MSH6P52701 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.26□□□□□ -1.73
MSH6P52701 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.26□□□□□ -1.73
MSH6P52701 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.26□□□□□ -1.73
MSH6P52701 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MSH6P52701 MTND2P13-201ENST00000577438 1039 ntBASIC4.26□□□□□ -1.73
MSH6P52701 FAM106CP-201ENST00000582212 507 ntBASIC4.26□□□□□ -1.73
MSH6P52701 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
MSH6P52701 VN1R78P-201ENST00000597393 564 ntBASIC4.26□□□□□ -1.73
MSH6P52701 AL034351.1-201ENST00000605288 668 ntBASIC4.26□□□□□ -1.73
MSH6P52701 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MSH6P52701 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH6P52701 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
MSH6P52701 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH6P52701 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSH6P52701 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH6P52701 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH6P52701 MIR30E-201ENST00000362104 92 ntBASIC4.25□□□□□ -1.73
MSH6P52701 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH6P52701 RNU6-178P-201ENST00000384631 104 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC104297.1-201ENST00000393779 870 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AL513174.1-201ENST00000423182 629 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC007563.3-201ENST00000433233 371 ntBASIC4.25□□□□□ -1.73
MSH6P52701 TPTE2P1-204ENST00000435256 593 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH6P52701 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH6P52701 HSPE1P22-201ENST00000456856 327 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC106872.2-201ENST00000494303 480 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC111000.2-201ENST00000507775 550 ntBASIC4.25□□□□□ -1.73
MSH6P52701 ARL2BPP6-201ENST00000512757 439 ntBASIC4.25□□□□□ -1.73
MSH6P52701 RNU6-1231P-201ENST00000517185 103 ntBASIC4.25□□□□□ -1.73
MSH6P52701 OR4C2P-201ENST00000530855 1064 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC091515.1-201ENST00000548110 679 ntBASIC4.25□□□□□ -1.73
MSH6P52701 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSH6P52701 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH6P52701 AC110741.2-201ENST00000605278 268 ntBASIC4.25□□□□□ -1.73
MSH6P52701 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH6P52701 AL590410.1-201ENST00000617925 333 ntBASIC4.25□□□□□ -1.73
MSH6P52701 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
MSH6P52701 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
MSH6P52701 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.24□□□□□ -1.73
MSH6P52701 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MSH6P52701 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH6P52701 RNA5SP105-201ENST00000391123 113 ntBASIC4.24□□□□□ -1.73
MSH6P52701 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
MSH6P52701 AC127526.1-201ENST00000417526 366 ntBASIC4.24□□□□□ -1.73
MSH6P52701 ETF1P3-201ENST00000430422 1160 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms