Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TRBV8-2-201ENST00000475637 270 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AP002812.1-201ENST00000495378 474 ntBASIC5.43□□□□□ -1.54
MRE11P49959 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 AC025881.1-201ENST00000518851 512 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.43□□□□□ -1.54
MRE11P49959 AC008083.2-201ENST00000546707 476 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AC133555.2-201ENST00000550213 292 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.43□□□□□ -1.54
MRE11P49959 ZNF519P3-201ENST00000557158 1032 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.43□□□□□ -1.54
MRE11P49959 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.43□□□□□ -1.54
MRE11P49959 AC084757.1-201ENST00000559987 490 ntBASIC5.43□□□□□ -1.54
MRE11P49959 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.43□□□□□ -1.54
MRE11P49959 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.43□□□□□ -1.54
MRE11P49959 AC091946.2-201ENST00000606105 291 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AF250324.2-201ENST00000608299 610 ntBASIC5.43□□□□□ -1.54
MRE11P49959 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.43□□□□□ -1.54
MRE11P49959 AC008758.3-201ENST00000507003 1829 ntBASIC5.43□□□□□ -1.54
MRE11P49959 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
MRE11P49959 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MRE11P49959 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.42□□□□□ -1.54
MRE11P49959 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MRE11P49959 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MRE11P49959 RN7SKP224-201ENST00000364140 325 ntBASIC5.42□□□□□ -1.54
MRE11P49959 Y_RNA.333-201ENST00000365274 102 ntBASIC5.42□□□□□ -1.54
MRE11P49959 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MRE11P49959 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.42□□□□□ -1.54
MRE11P49959 CHEK2P3-201ENST00000416118 248 ntBASIC5.42□□□□□ -1.54
MRE11P49959 UBTFL3-201ENST00000418934 1024 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC114814.2-201ENST00000419195 485 ntBASIC5.42□□□□□ -1.54
MRE11P49959 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.42□□□□□ -1.54
MRE11P49959 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.42□□□□□ -1.54
MRE11P49959 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.42□□□□□ -1.54
MRE11P49959 NANOGP6-201ENST00000429190 847 ntBASIC5.42□□□□□ -1.54
MRE11P49959 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.42□□□□□ -1.54
MRE11P49959 AL353597.2-202ENST00000434901 373 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.42□□□□□ -1.54
MRE11P49959 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MRE11P49959 AL451050.1-201ENST00000450126 415 ntBASIC5.42□□□□□ -1.54
MRE11P49959 FGF7P6-202ENST00000451282 293 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC092647.2-201ENST00000452998 253 ntBASIC5.42□□□□□ -1.54
MRE11P49959 RPL7P48-201ENST00000461513 746 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC063943.1-201ENST00000465434 453 ntBASIC5.42□□□□□ -1.54
MRE11P49959 UBTFL6-201ENST00000477929 1024 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC090013.1-201ENST00000485147 480 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 BTF3P13-201ENST00000513224 490 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.42□□□□□ -1.54
MRE11P49959 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.42□□□□□ -1.54
MRE11P49959 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.42□□□□□ -1.54
MRE11P49959 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.42□□□□□ -1.54
MRE11P49959 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 GTF2IP22-201ENST00000554443 182 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 BPTFP1-201ENST00000579209 492 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC091042.1-201ENST00000579213 173 ntBASIC5.42□□□□□ -1.54
MRE11P49959 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 AC024560.3-201ENST00000608482 349 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AL589743.7-201ENST00000612637 233 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.42□□□□□ -1.54
MRE11P49959 AC138932.5-201ENST00000617759 563 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.42□□□□□ -1.54
MRE11P49959 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MRE11P49959 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
MRE11P49959 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MRE11P49959 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MRE11P49959 AP000756.2-201ENST00000624168 2567 ntBASIC5.42□□□□□ -1.54
MRE11P49959 AC016588.2-201ENST00000632484 3021 ntBASIC5.42□□□□□ -1.54
MRE11P49959 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MRE11P49959 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.42□□□□□ -1.54
MRE11P49959 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MRE11P49959 AL133243.3-201ENST00000617415 3004 ntBASIC5.41□□□□□ -1.54
MRE11P49959 RNY4P24-201ENST00000362735 96 ntBASIC5.41□□□□□ -1.54
MRE11P49959 RNU6-374P-201ENST00000364146 108 ntBASIC5.41□□□□□ -1.54
MRE11P49959 RNU6-619P-201ENST00000365146 108 ntBASIC5.41□□□□□ -1.54
MRE11P49959 RNA5SP22-201ENST00000365393 109 ntBASIC5.41□□□□□ -1.54
MRE11P49959 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.41□□□□□ -1.54
MRE11P49959 RNU6-348P-201ENST00000384386 107 ntBASIC5.41□□□□□ -1.54
MRE11P49959 OR6C69P-201ENST00000394268 893 ntBASIC5.41□□□□□ -1.54
MRE11P49959 MTND4LP20-201ENST00000402379 270 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AL445189.1-201ENST00000405722 338 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms