Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 PTGES3P3-201ENST00000511479 482 ntBASIC3.24□□□□□ -1.89
RPA3P35244 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 ELOCP35-201ENST00000604289 336 ntBASIC3.24□□□□□ -1.89
RPA3P35244 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AL392112.1-201ENST00000605115 829 ntBASIC3.24□□□□□ -1.89
RPA3P35244 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.24□□□□□ -1.89
RPA3P35244 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AC084757.4-201ENST00000616350 526 ntBASIC3.24□□□□□ -1.89
RPA3P35244 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.24□□□□□ -1.89
RPA3P35244 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
RPA3P35244 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
RPA3P35244 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.24□□□□□ -1.89
RPA3P35244 SEPT7P7-201ENST00000420492 1301 ntBASIC3.23□□□□□ -1.89
RPA3P35244 MTND4P31-201ENST00000425607 1343 ntBASIC3.23□□□□□ -1.89
RPA3P35244 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RPA3P35244 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.23□□□□□ -1.89
RPA3P35244 RNU1-33P-201ENST00000364249 162 ntBASIC3.23□□□□□ -1.89
RPA3P35244 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.23□□□□□ -1.89
RPA3P35244 MIR7-1-201ENST00000384871 110 ntBASIC3.23□□□□□ -1.89
RPA3P35244 AC245054.2-201ENST00000415639 319 ntBASIC3.23□□□□□ -1.89
RPA3P35244 PTP4A1P5-201ENST00000420305 455 ntBASIC3.23□□□□□ -1.89
RPA3P35244 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.23□□□□□ -1.89
RPA3P35244 AL389915.1-201ENST00000422463 466 ntBASIC3.23□□□□□ -1.89
RPA3P35244 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.23□□□□□ -1.89
RPA3P35244 ARF4P2-201ENST00000430209 526 ntBASIC3.23□□□□□ -1.89
RPA3P35244 CYCSP43-201ENST00000438233 310 ntBASIC3.23□□□□□ -1.89
RPA3P35244 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.23□□□□□ -1.89
RPA3P35244 PRDX3P3-201ENST00000447765 522 ntBASIC3.23□□□□□ -1.89
RPA3P35244 AL358232.1-201ENST00000448030 501 ntBASIC3.23□□□□□ -1.89
RPA3P35244 UQCRHP3-201ENST00000451503 251 ntBASIC3.23□□□□□ -1.89
RPA3P35244 HMGN2P7-201ENST00000456186 273 ntBASIC3.23□□□□□ -1.89
RPA3P35244 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.23□□□□□ -1.89
RPA3P35244 AP001086.1-201ENST00000494882 321 ntBASIC3.23□□□□□ -1.89
RPA3P35244 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.23□□□□□ -1.89
RPA3P35244 AC093770.1-201ENST00000511559 571 ntBASIC3.23□□□□□ -1.89
RPA3P35244 MTCO1P30-201ENST00000515244 580 ntBASIC3.23□□□□□ -1.89
RPA3P35244 RNU2-58P-201ENST00000516403 183 ntBASIC3.23□□□□□ -1.89
RPA3P35244 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
RPA3P35244 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.23□□□□□ -1.89
RPA3P35244 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.23□□□□□ -1.89
RPA3P35244 TRAV37-201ENST00000553906 342 ntBASIC3.23□□□□□ -1.89
RPA3P35244 ADAM3B-201ENST00000569937 840 ntBASIC3.23□□□□□ -1.89
RPA3P35244 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
RPA3P35244 RNA5SP108-201ENST00000605921 117 ntBASIC3.23□□□□□ -1.89
RPA3P35244 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.23□□□□□ -1.89
RPA3P35244 AL356490.1-201ENST00000623079 479 ntBASIC3.23□□□□□ -1.89
RPA3P35244 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.23□□□□□ -1.89
RPA3P35244 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RPA3P35244 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RPA3P35244 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
RPA3P35244 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RPA3P35244 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
RPA3P35244 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RPA3P35244 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.22□□□□□ -1.89
RPA3P35244 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.22□□□□□ -1.89
RPA3P35244 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RPA3P35244 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RPA3P35244 RNU4-31P-201ENST00000384211 141 ntBASIC3.22□□□□□ -1.89
RPA3P35244 RNA5SP171-201ENST00000391071 115 ntBASIC3.22□□□□□ -1.89
RPA3P35244 AC097713.2-201ENST00000430199 356 ntBASIC3.22□□□□□ -1.89
RPA3P35244 XKRYP6-201ENST00000440468 1116 ntBASIC3.22□□□□□ -1.89
RPA3P35244 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 RPS7P5-201ENST00000441482 581 ntBASIC3.22□□□□□ -1.89
RPA3P35244 XKRYP3-201ENST00000442113 1116 ntBASIC3.22□□□□□ -1.89
RPA3P35244 RPL6P5-201ENST00000445678 828 ntBASIC3.22□□□□□ -1.89
RPA3P35244 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RPA3P35244 RPL7P38-201ENST00000488396 739 ntBASIC3.22□□□□□ -1.89
RPA3P35244 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 AC118282.1-201ENST00000506408 765 ntBASIC3.22□□□□□ -1.89
RPA3P35244 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.22□□□□□ -1.89
RPA3P35244 AC119751.1-201ENST00000513357 765 ntBASIC3.22□□□□□ -1.89
RPA3P35244 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.22□□□□□ -1.89
RPA3P35244 CCNG2P1-201ENST00000549521 1000 ntBASIC3.22□□□□□ -1.89
RPA3P35244 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.22□□□□□ -1.89
RPA3P35244 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.22□□□□□ -1.89
RPA3P35244 AC007687.1-201ENST00000602704 304 ntBASIC3.22□□□□□ -1.89
RPA3P35244 BNIP3P7-201ENST00000605641 516 ntBASIC3.22□□□□□ -1.89
RPA3P35244 AC244100.1-202ENST00000621554 382 ntBASIC3.22□□□□□ -1.89
RPA3P35244 AC008264.2-201ENST00000610193 3731 ntBASIC3.22□□□□□ -1.89
RPA3P35244 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.22□□□□□ -1.89
RPA3P35244 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RPA3P35244 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
RPA3P35244 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
RPA3P35244 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPA3P35244 OR6K3-202ENST00000368146 996 ntBASIC3.21□□□□□ -1.9
RPA3P35244 RNU6-356P-201ENST00000384140 107 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms