Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA13P31271 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA13P31271 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA13P31271 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA13P31271 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA13P31271 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA13P31271 AC023813.2-201ENST00000564321 469 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA13P31271 AC074051.3-201ENST00000570238 358 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA13P31271 MIR4444-1-201ENST00000581696 74 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 MIR4444-2-201ENST00000584390 74 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXA13P31271 AL512506.2-201ENST00000624472 458 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 AL596275.2-204ENST00000641628 552 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 AL596275.2-206ENST00000641957 626 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 AL355578.1-201ENST00000607405 1328 ntBASIC4.34□□□□□ -1.71
HOXA13P31271 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA13P31271 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA13P31271 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA13P31271 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA13P31271 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
HOXA13P31271 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.72
HOXA13P31271 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA13P31271 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA13P31271 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA13P31271 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HOXA13P31271 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 SAGE2P-201ENST00000420011 2126 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA13P31271 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA13P31271 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 RNU6-984P-201ENST00000363236 109 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXA13P31271 SNORA40.2-201ENST00000390847 128 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC007066.1-201ENST00000392902 381 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA13P31271 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA13P31271 AC092647.1-201ENST00000420654 287 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA13P31271 AC008065.1-201ENST00000428525 348 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 UBE2V1P1-201ENST00000430836 445 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA13P31271 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA13P31271 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA13P31271 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA13P31271 RPL21P71-201ENST00000465598 459 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA13P31271 AC022795.1-201ENST00000473808 480 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA13P31271 MTCO3P35-201ENST00000485582 781 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 HMGB1P21-201ENST00000502313 581 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA13P31271 RNU1-95P-201ENST00000516357 160 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 RNU1-128P-201ENST00000516704 160 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 RNA5SP143-201ENST00000516936 115 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA13P31271 AP001189.2-201ENST00000527320 189 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA13P31271 LRRC34P1-201ENST00000542742 915 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 MTND3P12-201ENST00000559068 328 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC067852.4-201ENST00000590314 478 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA13P31271 GAS5-AS1-201ENST00000602767 694 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 MTND3P19-201ENST00000603825 345 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 SNORA62.6-201ENST00000606322 83 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AL391497.1-201ENST00000608671 547 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC024257.5-201ENST00000612739 531 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC006386.1-201ENST00000619436 415 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC013470.4-201ENST00000619978 986 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 AC090897.3-201ENST00000636973 1157 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 MAPK10-372ENST00000641954 3413 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA13P31271 UBE3AP2-201ENST00000429033 2259 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXA13P31271 AC025125.1-201ENST00000624743 1922 ntBASIC4.33□□□□□ -1.72
HOXA13P31271 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA13P31271 LINC02471-203ENST00000641941 4752 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA13P31271 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HOXA13P31271 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HOXA13P31271 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXA13P31271 SNORA71.3-201ENST00000362582 128 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 RNU6-492P-201ENST00000363035 104 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA13P31271 MIR217-201ENST00000384817 110 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 MIR200C-201ENST00000384980 68 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 SNORD65.1-201ENST00000390889 71 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 RPL21P17-201ENST00000397467 475 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 RPS24P12-201ENST00000402084 394 ntBASIC4.32□□□□□ -1.72
HOXA13P31271 AC073264.1-201ENST00000411508 416 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms