Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN6P29350 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN6P29350 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN6P29350 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN6P29350 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PTPN6P29350 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 CR381670.1-201ENST00000624291 1693 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PTPN6P29350 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 RNU6-837P-201ENST00000391056 108 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 HSPE1P8-201ENST00000406997 288 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 RNU2-71P-201ENST00000411395 189 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 MTND4P22-201ENST00000413116 1169 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN6P29350 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN6P29350 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN6P29350 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN6P29350 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN6P29350 VN1R17P-201ENST00000472048 1090 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 RPS3AP6-201ENST00000484430 795 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AC005726.1-201ENST00000494679 427 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AC011352.3-201ENST00000505162 593 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AC091860.1-201ENST00000505723 432 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 RAC1P2-201ENST00000511164 579 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AC112198.4-201ENST00000515450 351 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AC104057.1-201ENST00000515547 497 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
PTPN6P29350 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN6P29350 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 AC023825.1-201ENST00000566704 1030 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 RN7SL703P-201ENST00000578485 302 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AP001542.2-201ENST00000593141 364 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AL606490.9-201ENST00000603331 271 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AL592436.1-201ENST00000605135 558 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AP003476.1-201ENST00000623984 516 ntBASIC3.63□□□□□ -1.83
PTPN6P29350 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN6P29350 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PTPN6P29350 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN6P29350 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PTPN6P29350 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN6P29350 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN6P29350 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PTPN6P29350 AP002001.2-201ENST00000529025 1469 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN6P29350 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
PTPN6P29350 RNU6-600P-201ENST00000362524 99 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 RNU6-1181P-201ENST00000384191 106 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 RNU6-441P-201ENST00000384545 106 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 RNU6-328P-201ENST00000390887 106 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN6P29350 MTCO3P31-201ENST00000405526 789 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AL138880.1-201ENST00000405824 642 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN6P29350 RPL36AP36-201ENST00000418616 301 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN6P29350 AC096632.1-201ENST00000427395 310 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 MTCYBP15-201ENST00000433123 1127 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN6P29350 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 SNORA71B-202ENST00000439232 272 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 CFTRP1-201ENST00000456646 183 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PTPN6P29350 RPS4XP15-201ENST00000489210 795 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 HMGB1P38-201ENST00000490557 577 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 RPL21P129-201ENST00000491732 478 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC093801.2-201ENST00000503966 1050 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 SLC25A15P5-201ENST00000508033 253 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC109471.1-201ENST00000511631 612 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN6P29350 RN7SKP116-201ENST00000516902 319 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 MED28P5-201ENST00000528254 438 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AP003066.2-201ENST00000529375 555 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN6P29350 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN6P29350 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN6P29350 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN6P29350 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PTPN6P29350 AC074051.3-201ENST00000570238 358 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC126365.2-201ENST00000580630 379 ntBASIC3.62□□□□□ -1.83
PTPN6P29350 AC008507.2-201ENST00000588402 1176 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms