Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU6-550P-201ENST00000391057 101 ntBASIC6.37□□□□□ -1.39
VARSP26640 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VARSP26640 RN7SKP86-201ENST00000410454 332 ntBASIC6.37□□□□□ -1.39
VARSP26640 RPL30P2-201ENST00000414021 291 ntBASIC6.37□□□□□ -1.39
VARSP26640 GJA6P-201ENST00000415117 1042 ntBASIC6.37□□□□□ -1.39
VARSP26640 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.37□□□□□ -1.39
VARSP26640 RBMY1KP-201ENST00000423480 476 ntBASIC6.37□□□□□ -1.39
VARSP26640 RPL7P37-201ENST00000425095 738 ntBASIC6.37□□□□□ -1.39
VARSP26640 USP9YP30-201ENST00000430729 455 ntBASIC6.37□□□□□ -1.39
VARSP26640 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 SNORD5.1-201ENST00000458800 75 ntBASIC6.37□□□□□ -1.39
VARSP26640 AP001992.1-205ENST00000462248 379 ntBASIC6.37□□□□□ -1.39
VARSP26640 RPL21P8-201ENST00000465083 535 ntBASIC6.37□□□□□ -1.39
VARSP26640 AC099340.1-201ENST00000475247 599 ntBASIC6.37□□□□□ -1.39
VARSP26640 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 ATP5LP5-201ENST00000483050 299 ntBASIC6.37□□□□□ -1.39
VARSP26640 AC026784.1-201ENST00000507986 352 ntBASIC6.37□□□□□ -1.39
VARSP26640 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.37□□□□□ -1.39
VARSP26640 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 EIF4A2P5-201ENST00000529914 499 ntBASIC6.37□□□□□ -1.39
VARSP26640 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 DYNLL1P4-201ENST00000549314 266 ntBASIC6.37□□□□□ -1.39
VARSP26640 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 AL049779.3-201ENST00000557141 606 ntBASIC6.37□□□□□ -1.39
VARSP26640 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 MIR3941-201ENST00000582572 103 ntBASIC6.37□□□□□ -1.39
VARSP26640 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.37□□□□□ -1.39
VARSP26640 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.37□□□□□ -1.39
VARSP26640 AL031176.1-201ENST00000604554 466 ntBASIC6.37□□□□□ -1.39
VARSP26640 SNORD96A-201ENST00000606577 79 ntBASIC6.37□□□□□ -1.39
VARSP26640 SDR42E1P2-201ENST00000614861 481 ntBASIC6.37□□□□□ -1.39
VARSP26640 SDR42E1P4-201ENST00000620894 481 ntBASIC6.37□□□□□ -1.39
VARSP26640 AC005514.1-201ENST00000623521 208 ntBASIC6.37□□□□□ -1.39
VARSP26640 AL033543.1-201ENST00000623440 13454 ntBASIC6.37□□□□□ -1.39
VARSP26640 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.37□□□□□ -1.39
VARSP26640 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 AC097461.1-201ENST00000568928 2821 ntBASIC6.37□□□□□ -1.39
VARSP26640 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
VARSP26640 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VARSP26640 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VARSP26640 AC074029.4-201ENST00000624796 1859 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC134882.1-201ENST00000603738 1676 ntBASIC6.36□□□□□ -1.39
VARSP26640 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.36□□□□□ -1.39
VARSP26640 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 Y_RNA.26-201ENST00000362539 101 ntBASIC6.36□□□□□ -1.39
VARSP26640 Y_RNA.314-201ENST00000365114 102 ntBASIC6.36□□□□□ -1.39
VARSP26640 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 RNU6-225P-201ENST00000384613 103 ntBASIC6.36□□□□□ -1.39
VARSP26640 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VARSP26640 RPL12P23-201ENST00000405880 490 ntBASIC6.36□□□□□ -1.39
VARSP26640 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VARSP26640 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.36□□□□□ -1.39
VARSP26640 ELOCP20-201ENST00000422460 345 ntBASIC6.36□□□□□ -1.39
VARSP26640 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.36□□□□□ -1.39
VARSP26640 MRPS18BP2-201ENST00000434310 759 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC128677.1-201ENST00000436016 442 ntBASIC6.36□□□□□ -1.39
VARSP26640 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 GAPDHP33-201ENST00000443168 1013 ntBASIC6.36□□□□□ -1.39
VARSP26640 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 UBBP5-201ENST00000446970 266 ntBASIC6.36□□□□□ -1.39
VARSP26640 PLGLA-201ENST00000465668 449 ntBASIC6.36□□□□□ -1.39
VARSP26640 RPL23AP64-201ENST00000469465 435 ntBASIC6.36□□□□□ -1.39
VARSP26640 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.36□□□□□ -1.39
VARSP26640 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.36□□□□□ -1.39
VARSP26640 GAPDHP62-201ENST00000515313 990 ntBASIC6.36□□□□□ -1.39
VARSP26640 RN7SKP196-201ENST00000516267 345 ntBASIC6.36□□□□□ -1.39
VARSP26640 Y_RNA.700-201ENST00000516806 100 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.36□□□□□ -1.39
VARSP26640 FAM60DP-201ENST00000524174 632 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC023245.2-201ENST00000530760 2978 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.36□□□□□ -1.39
VARSP26640 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.36□□□□□ -1.39
VARSP26640 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 AC005899.2-201ENST00000584353 90 ntBASIC6.36□□□□□ -1.39
VARSP26640 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.36□□□□□ -1.39
VARSP26640 HMGB1P50-201ENST00000605814 607 ntBASIC6.36□□□□□ -1.39
VARSP26640 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.36□□□□□ -1.39
VARSP26640 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.36□□□□□ -1.39
VARSP26640 AL596245.1-201ENST00000618994 362 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC073592.6-201ENST00000624271 415 ntBASIC6.36□□□□□ -1.39
VARSP26640 AC091925.2-201ENST00000625059 256 ntBASIC6.36□□□□□ -1.39
VARSP26640 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.36□□□□□ -1.39
VARSP26640 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 NXPH1-205ENST00000602349 1953 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms