Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC123768.4-201ENST00000616244 701 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL8A2P25067 RIOK3P1-201ENST00000418778 1528 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.77□□□□□ -1.97
COL8A2P25067 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
COL8A2P25067 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 AC017071.1-201ENST00000564407 2204 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.76□□□□□ -1.97
COL8A2P25067 RNU1-70P-201ENST00000362618 164 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 CCNB2P1-201ENST00000399411 1150 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC069218.2-201ENST00000411665 344 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AL024507.1-201ENST00000412741 274 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 LIPT1P1-201ENST00000415870 1186 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC008280.1-201ENST00000418851 412 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 RPL31P12-201ENST00000422587 358 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC092832.1-201ENST00000422934 400 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 FAR1P1-201ENST00000427163 934 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 AL606490.7-201ENST00000433136 191 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC127537.2-201ENST00000439258 465 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 CBX1P4-201ENST00000439415 457 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 ATP5C1P1-201ENST00000441945 895 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 MTND5P8-201ENST00000449817 1083 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 RPS4XP2-201ENST00000458402 793 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AL035404.1-201ENST00000497982 568 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 DSTNP2-201ENST00000504533 515 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.76□□□□□ -1.97
COL8A2P25067 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.76□□□□□ -1.97
COL8A2P25067 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC107934.2-201ENST00000518653 310 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AP001636.2-201ENST00000525517 696 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.76□□□□□ -1.97
COL8A2P25067 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.76□□□□□ -1.97
COL8A2P25067 GTF2IP8-201ENST00000560687 584 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.76□□□□□ -1.97
COL8A2P25067 AC125494.3-201ENST00000602759 455 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC005000.2-201ENST00000605468 310 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.76□□□□□ -1.97
COL8A2P25067 AL355816.1-201ENST00000607951 118 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AL450489.1-201ENST00000612071 468 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AC073592.7-201ENST00000623659 507 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 AP003072.4-201ENST00000624580 310 ntBASIC2.76□□□□□ -1.97
COL8A2P25067 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
COL8A2P25067 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.76□□□□□ -1.97
COL8A2P25067 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL8A2P25067 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.75□□□□□ -1.97
COL8A2P25067 MTND4P21-201ENST00000453886 1357 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
COL8A2P25067 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
COL8A2P25067 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL8A2P25067 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL8A2P25067 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL8A2P25067 RNA5SP374-201ENST00000362939 125 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL8A2P25067 MIR128-1-201ENST00000384921 82 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.75□□□□□ -1.97
COL8A2P25067 RPS7P13-201ENST00000413955 498 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AL353678.1-201ENST00000422735 741 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.75□□□□□ -1.97
COL8A2P25067 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 RPL30P3-201ENST00000424262 333 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AL512649.1-201ENST00000428997 581 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 MTND4LP7-201ENST00000431728 294 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 MTCYBP31-201ENST00000438855 1122 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.75□□□□□ -1.97
COL8A2P25067 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC010401.1-201ENST00000463867 348 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms