Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNORA17.5-201ENST00000630429 132 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.14□□□□□ -1.59
COL6A2P12110 AL672167.1-204ENST00000641875 3017 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 AL445437.1-201ENST00000623157 3087 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC092447.10-201ENST00000620607 1652 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
COL6A2P12110 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 SNORA51.1-201ENST00000363243 140 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 RNU4-76P-201ENST00000364509 141 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 RNA5SP90-201ENST00000364801 99 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 RNU6-1009P-201ENST00000390996 107 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 MRPL42P2-201ENST00000403169 426 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AL035079.1-201ENST00000405210 287 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 RN7SKP263-201ENST00000411194 309 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC234779.1-201ENST00000425910 285 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AL139148.1-201ENST00000427122 680 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 AL390119.1-201ENST00000440329 312 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 CALM1P1-201ENST00000442082 433 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AL136380.1-201ENST00000447970 162 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 TPT1P14-201ENST00000448018 505 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 BTF3P6-201ENST00000448054 499 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC092001.1-201ENST00000453012 261 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC023194.1-201ENST00000493084 308 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC104057.1-201ENST00000515547 497 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC012400.1-201ENST00000518452 381 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC022616.6-201ENST00000520479 119 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC112191.2-201ENST00000522428 333 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL6A2P12110 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.13□□□□□ -1.59
COL6A2P12110 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC068790.5-201ENST00000602741 355 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC005191.1-201ENST00000603950 358 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC139792.3-201ENST00000623525 224 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.13□□□□□ -1.59
COL6A2P12110 AC135068.12-201ENST00000637370 931 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 AC010149.2-201ENST00000637608 315 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 Z95331.1-201ENST00000623075 23112 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 ZNF652P1-201ENST00000442420 1309 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.13□□□□□ -1.59
COL6A2P12110 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL6A2P12110 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL6A2P12110 AL731566.1-201ENST00000620490 1937 ntBASIC5.13□□□□□ -1.59
COL6A2P12110 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.12□□□□□ -1.59
COL6A2P12110 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC130650.2-201ENST00000618736 2403 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 Z95327.2-201ENST00000414579 1873 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 RNU6-1293P-201ENST00000384077 107 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL6A2P12110 U3.32-201ENST00000408116 212 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.12□□□□□ -1.59
COL6A2P12110 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 RPS29P10-201ENST00000439197 166 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms