Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AP004242.1-201ENST00000533701 349 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.21□□□□□ -1.9
FAM228BP0C875 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.21□□□□□ -1.9
FAM228BP0C875 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.21□□□□□ -1.9
FAM228BP0C875 MAGOH2P-202ENST00000584384 429 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.21□□□□□ -1.9
FAM228BP0C875 AC083760.1-201ENST00000589621 670 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 AL031985.2-201ENST00000600955 480 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 AC019176.2-201ENST00000611579 315 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 MIR7112-201ENST00000616126 65 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 AC139769.3-201ENST00000618383 175 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 RPL23AP61-201ENST00000623642 466 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 AC116563.2-201ENST00000624751 535 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 AC139713.2-210ENST00000641741 992 ntBASIC3.21□□□□□ -1.9
FAM228BP0C875 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
FAM228BP0C875 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FAM228BP0C875 AC117529.2-201ENST00000512159 2068 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AC013404.1-201ENST00000413068 249 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FAM228BP0C875 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.2□□□□□ -1.9
FAM228BP0C875 RPS29P6-201ENST00000438196 145 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.2□□□□□ -1.9
FAM228BP0C875 Z95327.1-201ENST00000446082 482 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 PRDX3P3-201ENST00000447765 522 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.2□□□□□ -1.9
FAM228BP0C875 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.2□□□□□ -1.9
FAM228BP0C875 HSPD1P15-201ENST00000505573 1122 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AC147055.1-201ENST00000509261 750 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
FAM228BP0C875 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.2□□□□□ -1.9
FAM228BP0C875 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.2□□□□□ -1.9
FAM228BP0C875 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.2□□□□□ -1.9
FAM228BP0C875 AP000619.3-201ENST00000535634 1127 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.2□□□□□ -1.9
FAM228BP0C875 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.2□□□□□ -1.9
FAM228BP0C875 AL020997.2-201ENST00000602607 184 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AP003117.1-201ENST00000602771 554 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AC005156.1-201ENST00000613371 573 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AL133370.2-201ENST00000619934 439 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 AC119674.1-212ENST00000641155 993 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 XPOTP1-201ENST00000443317 2398 ntBASIC3.2□□□□□ -1.9
FAM228BP0C875 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FAM228BP0C875 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
FAM228BP0C875 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
FAM228BP0C875 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
FAM228BP0C875 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FAM228BP0C875 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FAM228BP0C875 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.19□□□□□ -1.9
FAM228BP0C875 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
FAM228BP0C875 SNORA51.4-201ENST00000364993 124 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 MIR449B-201ENST00000384995 97 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 MIR181B1-201ENST00000385240 110 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 SNORD65-201ENST00000391079 73 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.19□□□□□ -1.9
FAM228BP0C875 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 RPL31P45-201ENST00000419532 356 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AL353678.1-201ENST00000422735 741 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 SLC31A1P1-201ENST00000451221 567 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 RPL31P53-201ENST00000457065 348 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.19□□□□□ -1.9
FAM228BP0C875 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AC010285.3-201ENST00000511668 676 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
FAM228BP0C875 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.19□□□□□ -1.9
FAM228BP0C875 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FAM228BP0C875 AC010198.2-201ENST00000550612 259 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 FAM60CP-201ENST00000591086 664 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 MTCO2P22-201ENST00000603246 681 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 AP003117.2-201ENST00000606010 545 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FAM228BP0C875 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.19□□□□□ -1.9
FAM228BP0C875 AL162574.2-201ENST00000614618 657 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 AC026422.1-201ENST00000623961 452 ntBASIC3.19□□□□□ -1.9
FAM228BP0C875 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.19□□□□□ -1.9
FAM228BP0C875 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FAM228BP0C875 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FAM228BP0C875 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
FAM228BP0C875 AC024341.1-201ENST00000526444 1552 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FAM228BP0C875 AC096656.1-201ENST00000623826 1364 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 ATP5F1P3-201ENST00000397213 657 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 AL356967.1-201ENST00000406305 431 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 U3.42-201ENST00000408746 214 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 RN7SKP58-201ENST00000411010 305 ntBASIC3.18□□□□□ -1.9
FAM228BP0C875 MTND4P11-201ENST00000417020 1058 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms